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Aliases for RNU1-84P Gene

Subcategory (RNA class) for RNU1-84P Gene

snRNA

Aliases for RNU1-84P Gene

  • RNA, U1 Small Nuclear 84, Pseudogene 2 3 5

External Ids for RNU1-84P Gene

ORGUL Members for RNU1-84P Gene

Previous GeneCards Identifiers for RNU1-84P Gene

  • GC11P066165
  • GC00U935549
  • GC11P066398
  • GC11P066403
  • GC11P066405
  • GC11P066408
  • GC11P066411
  • GC11P066413
  • GC11P066415

Summaries for RNU1-84P Gene

GeneCards Summary for RNU1-84P Gene

RNU1-84P (RNA, U1 Small Nuclear 84, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU1-84P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-84P Gene

Genomics for RNU1-84P Gene

GeneHancer (GH) Regulatory Elements for RNU1-84P Gene

Promoters and enhancers for RNU1-84P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I066508 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 +116.7 116680 2.9 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 SLC30A9 ZNF213 BBS1 ENSG00000256349 ENSG00000258297 RBM14 RBM4 DPP3 EIF1AD KDM2A PCNX3 ENSG00000245156
GH11I066694 Enhancer 1.2 Ensembl ENCODE 10.3 +301.4 301401 1 HDGF ARNT ARID4B SIN3A ZNF2 IRF4 SLC30A9 E2F8 ZNF143 DEK SPTBN2 C11orf80 RCE1 ZDHHC24 ACTN3 LRFN4 PC RNU7-23P BRD9P1 RNU1-84P
GH11I066458 Enhancer 0.6 ENCODE 10.8 +66.0 65969 1.1 NR2F1 EBF1 DPF2 IRF4 ZNF316 IKZF1 NBN ATF7 RUNX3 IKZF2 ACTN3 ENSG00000201733 LOC100505504 NPAS4 RNU1-84P BRD9P1 ZDHHC24 RAD9A GC11P066455 PELI3
GH11I066454 Enhancer 0.4 FANTOM5 11.1 +61.0 60953 0.2 STAT1 GC11P066455 LOC100505524 LOC101928069 DPP3 RBM4 NPAS4 LOC100505504 BRD9P1 RNU1-84P CD248
GH11I066895 Enhancer 0.3 dbSUPER 9.9 +502.4 502407 1.5 REST LRFN4 RNU7-23P PC SYT12 RHOD CLCF1 ENSG00000256514 RNU1-84P BRD9P1 ACTN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU1-84P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU1-84P Gene

Genomic Locations for RNU1-84P Gene
chr11:66,393,449-66,393,612
(GRCh38/hg38)
Size:
164 bases
Orientation:
Plus strand

Genomic View for RNU1-84P Gene

Genes around RNU1-84P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-84P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-84P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-84P Gene

Proteins for RNU1-84P Gene

Post-translational modifications for RNU1-84P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-84P Gene

Domains & Families for RNU1-84P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-84P Gene

Function for RNU1-84P Gene

Phenotypes From GWAS Catalog for RNU1-84P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-84P Gene

Localization for RNU1-84P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU1-84P Gene

Pathways & Interactions for RNU1-84P Gene

SuperPathways for RNU1-84P Gene

No Data Available

Interacting Proteins for RNU1-84P Gene

Gene Ontology (GO) - Biological Process for RNU1-84P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU1-84P Gene

Drugs & Compounds for RNU1-84P Gene

No Compound Related Data Available

Transcripts for RNU1-84P Gene

mRNA/cDNA for RNU1-84P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-84P Gene

No ASD Table

Relevant External Links for RNU1-84P Gene

GeneLoc Exon Structure for
RNU1-84P
ECgene alternative splicing isoforms for
RNU1-84P

Expression for RNU1-84P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU1-84P Gene

genes like me logo Genes that share expression patterns with RNU1-84P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU1-84P Gene

Orthologs for RNU1-84P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU1-84P Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia U1 34
  • 82 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23737 34
  • 82 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia U1 34
  • 76 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U1 34
  • 70 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U1 34
  • 84 (a)
OneToOne
Species where no ortholog for RNU1-84P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU1-84P Gene

ENSEMBL:
Gene Tree for RNU1-84P (if available)
TreeFam:
Gene Tree for RNU1-84P (if available)

Paralogs for RNU1-84P Gene

No data available for Paralogs for RNU1-84P Gene

Variants for RNU1-84P Gene

Additional Variant Information for RNU1-84P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-84P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-84P Gene

Disorders for RNU1-84P Gene

No disorders were found for RNU1-84P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-84P Gene

Publications for RNU1-84P Gene

No publications were found for RNU1-84P Gene.

Products for RNU1-84P Gene

Sources for RNU1-84P Gene

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