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Aliases for RNU1-73P Gene

Subcategory (RNA class) for RNU1-73P Gene

snRNA

Aliases for RNU1-73P Gene

  • RNA, U1 Small Nuclear 73, Pseudogene 2 3 5

External Ids for RNU1-73P Gene

ORGUL Members for RNU1-73P Gene

Previous GeneCards Identifiers for RNU1-73P Gene

  • GC05M096512
  • GC00U935616

Summaries for RNU1-73P Gene

GeneCards Summary for RNU1-73P Gene

RNU1-73P (RNA, U1 Small Nuclear 73, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-73P Gene

Genomics for RNU1-73P Gene

Regulatory Elements for RNU1-73P Gene

Enhancers for RNU1-73P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F097181 1.1 ENCODE 0.4 -7.0 -7002 2.6 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 RIOK2 ENSG00000248202 GC05M097176 RNU1-73P
GH05F097167 0.7 ENCODE 0.4 +8.5 8500 1.0 ZSCAN18 MTA2 JUNB ZNF316 POLR2A IKZF1 NBN MAFK CREM SPI1 RIOK2 ENSG00000248202 LIX1 ERAP1 ENSG00000248734 GC05M097176 RNU1-73P
GH05F097162 0.7 ENCODE 0.4 +14.0 13962 0.2 CTCF ZNF654 TRIM22 ZEB2 REST RAD21 ZBTB48 ZNF366 IKZF1 ZNF143 ERAP1 ENSG00000248734 GC05M097176 RNU1-73P LIX1
GH05F097165 0.5 ENCODE 0.4 +10.4 10365 1.3 HNF1A SCRT2 ZNF644 ENSG00000248202 LIX1 ERAP1 ENSG00000248734 GC05M097176 RNU1-73P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU1-73P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU1-73P Gene

Chromosome:
5
Start:
97,175,950 bp from pter
End:
97,176,113 bp from pter
Size:
164 bases
Orientation:
Minus strand

Genomic View for RNU1-73P Gene

Genes around RNU1-73P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-73P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-73P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-73P Gene

Proteins for RNU1-73P Gene

Post-translational modifications for RNU1-73P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-73P Gene

Domains & Families for RNU1-73P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-73P Gene

Function for RNU1-73P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-73P Gene

Localization for RNU1-73P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU1-73P Gene

Pathways & Interactions for RNU1-73P Gene

SuperPathways for RNU1-73P Gene

No Data Available

Interacting Proteins for RNU1-73P Gene

Gene Ontology (GO) - Biological Process for RNU1-73P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU1-73P Gene

Transcripts for RNU1-73P Gene

mRNA/cDNA for RNU1-73P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-73P Gene

No ASD Table

Relevant External Links for RNU1-73P Gene

GeneLoc Exon Structure for
RNU1-73P
ECgene alternative splicing isoforms for
RNU1-73P

Expression for RNU1-73P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU1-73P Gene

genes like me logo Genes that share expression patterns with RNU1-73P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU1-73P Gene

Orthologs for RNU1-73P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU1-73P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U1 35
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22979 35
  • 69 (a)
OneToMany
Gm23850 35
  • 66 (a)
OneToMany
dog
(Canis familiaris)
Mammalia U1 35
  • 67 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U1 35
  • 63 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U1 35
  • 55 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U1 35
  • 40 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U1 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35
  • 62 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea U1 35
  • 63 (a)
OneToMany
Species where no ortholog for RNU1-73P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU1-73P Gene

ENSEMBL:
Gene Tree for RNU1-73P (if available)
TreeFam:
Gene Tree for RNU1-73P (if available)

Paralogs for RNU1-73P Gene

No data available for Paralogs for RNU1-73P Gene

Variants for RNU1-73P Gene

Relevant External Links for RNU1-73P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-73P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-73P Gene

Disorders for RNU1-73P Gene

No disorders were found for RNU1-73P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-73P Gene

Publications for RNU1-73P Gene

No publications were found for RNU1-73P Gene.

Products for RNU1-73P Gene

Sources for RNU1-73P Gene

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