Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU1-5P Gene

Subcategory (RNA class) for RNU1-5P Gene

snRNA

Aliases for RNU1-5P Gene

  • RNA, U1 Small Nuclear 5, Pseudogene 2 3 5
  • RNA, U1 Small Nuclear 5 2
  • RNU1-5 3

External Ids for RNU1-5P Gene

ORGUL Members for RNU1-5P Gene

Previous HGNC Symbols for RNU1-5P Gene

  • RNU1-5

Previous GeneCards Identifiers for RNU1-5P Gene

  • GC00U934307
  • GC01P016880
  • GC01P016884
  • GC01P016887

Summaries for RNU1-5P Gene

GeneCards Summary for RNU1-5P Gene

RNU1-5P (RNA, U1 Small Nuclear 5, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-5P Gene

Genomics for RNU1-5P Gene

Regulatory Elements for RNU1-5P Gene

Enhancers for RNU1-5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F016874 0.9 Ensembl ENCODE 0.8 +1.6 1647 1.2 CTCF TBP SREBF2 CEBPB RARA POLR3A GLIS1 ZBTB33 TCF7L2 LOC105376805 MST1P2 GC01P016900 RNU1-5P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNU1-5P on UCSC Golden Path with GeneCards custom track

Promoters for RNU1-5P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001742067 -208 201 CTCF ZNF687 ZNF692 ZBTB33 ZBTB20
ENSR00001742066 -1008 601 SREBF2 ZNF76 KLF17 SIN3A ZEB1 GLIS2 POLR3A ZNF366 SP3 ZEB2

Genomic Location for RNU1-5P Gene

Chromosome:
1
Start:
16,873,708 bp from pter
End:
16,873,851 bp from pter
Size:
144 bases
Orientation:
Plus strand

Genomic View for RNU1-5P Gene

Genes around RNU1-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-5P Gene

Proteins for RNU1-5P Gene

Post-translational modifications for RNU1-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-5P Gene

Domains & Families for RNU1-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-5P Gene

Function for RNU1-5P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-5P Gene

Localization for RNU1-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU1-5P Gene

Pathways & Interactions for RNU1-5P Gene

SuperPathways for RNU1-5P Gene

No Data Available

Interacting Proteins for RNU1-5P Gene

Gene Ontology (GO) - Biological Process for RNU1-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU1-5P Gene

Transcripts for RNU1-5P Gene

mRNA/cDNA for RNU1-5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-5P Gene

No ASD Table

Relevant External Links for RNU1-5P Gene

GeneLoc Exon Structure for
RNU1-5P
ECgene alternative splicing isoforms for
RNU1-5P

Expression for RNU1-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU1-5P Gene

Orthologs for RNU1-5P Gene

Evolution for RNU1-5P Gene

ENSEMBL:
Gene Tree for RNU1-5P (if available)
TreeFam:
Gene Tree for RNU1-5P (if available)

No data available for Orthologs for RNU1-5P Gene

Paralogs for RNU1-5P Gene

No data available for Paralogs for RNU1-5P Gene

Variants for RNU1-5P Gene

Relevant External Links for RNU1-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-5P Gene

Disorders for RNU1-5P Gene

No disorders were found for RNU1-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-5P Gene

Publications for RNU1-5P Gene

No publications were found for RNU1-5P Gene.

Products for RNU1-5P Gene

Sources for RNU1-5P Gene

Content
Loading form....