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Aliases for RNU1-11P Gene

Aliases for RNU1-11P Gene

  • RNA, U1 Small Nuclear 11, Pseudogene 2 3
  • RNA, U1 Small Nuclear 11 (Pseudogene) 2 3
  • RNA, U1 Small Nuclear Pseudogene 5 2 3
  • RNU1P1 3
  • RNU1P5 3
  • U1P1A 3

External Ids for RNU1-11P Gene

Previous HGNC Symbols for RNU1-11P Gene

  • RNU1P5

Previous GeneCards Identifiers for RNU1-11P Gene

  • GC01U902398

Summaries for RNU1-11P Gene

GeneCards Summary for RNU1-11P Gene

RNU1-11P (RNA, U1 Small Nuclear 11, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-11P Gene

Genomics for RNU1-11P Gene

Genomic Location for RNU1-11P Gene

Start:
13,214,040 bp from pter
End:
13,214,255 bp from pter
Size:
216 bases
Orientation:
Plus strand

Genomic View for RNU1-11P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNU1-11P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-11P Gene

No data available for Regulatory Elements for RNU1-11P Gene

Proteins for RNU1-11P Gene

Post-translational modifications for RNU1-11P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-11P Gene

Domains for RNU1-11P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-11P Gene

Function for RNU1-11P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNU1-11P Gene

Localization for RNU1-11P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU1-11P Gene

Pathways for RNU1-11P Gene

SuperPathways for RNU1-11P Gene

No Data Available

Interacting Proteins for RNU1-11P Gene

Gene Ontology (GO) - Biological Process for RNU1-11P Gene

None

No data available for Pathways by source for RNU1-11P Gene

Transcripts for RNU1-11P Gene

mRNA/cDNA for RNU1-11P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-11P Gene

No ASD Table

Relevant External Links for RNU1-11P Gene

GeneLoc Exon Structure for
RNU1-11P
ECgene alternative splicing isoforms for
RNU1-11P

Expression for RNU1-11P Gene

mRNA expression in normal human tissues for RNU1-11P Gene

mRNA differential expression in normal tissues according to GTEx for RNU1-11P Gene

This gene is overexpressed in Testis (12.6) and Brain - Cerebellar Hemisphere (7.3).
genes like me logo Genes that share expressions with RNU1-11P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for RNU1-11P Gene

Orthologs for RNU1-11P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU1-11P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U1 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U1 36
  • 86 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U1 36
  • 92 (a)
ManyToMany
Species with no ortholog for RNU1-11P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU1-11P Gene

ENSEMBL:
Gene Tree for RNU1-11P (if available)
TreeFam:
Gene Tree for RNU1-11P (if available)

Paralogs for RNU1-11P Gene

No data available for Paralogs for RNU1-11P Gene

Variants for RNU1-11P Gene

Relevant External Links for RNU1-11P Gene

HapMap Linkage Disequilibrium report
RNU1-11P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RNU1-11P Gene

Disorders for RNU1-11P Gene

Relevant External Links for RNU1-11P

Genetic Association Database (GAD)
RNU1-11P
genes like me logo Genes that share disorders with RNU1-11P: view

No data available for UniProtKB/Swiss-Prot for RNU1-11P Gene

Publications for RNU1-11P Gene

  1. Characterization of small nuclear RNA U1 gene candidates and pseudogenes from the human genome. (PMID: 6180116) Manser T. … Gesteland R.F. (J. Mol. Appl. Genet. 1981) 2 3
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 48
  3. Direct repeats flank three small nuclear RNA pseudogenes in the human genome. (PMID: 6173130) Van Arsdell S.W. … Gesteland R.F. (Cell 1981) 3

Products for RNU1-11P Gene

Sources for RNU1-11P Gene

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