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Aliases for RNR1 Gene

Subcategory (RNA class) for RNR1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RNR1 Gene

  • RNA, Ribosomal Cluster 1 2 3
  • RNA, Ribosomal 1 2

External Ids for RNR1 Gene

Summaries for RNR1 Gene

Entrez Gene Summary for RNR1 Gene

  • The genes encoding the rRNA components of the ribosome are organized as tandem rDNA repeating units, designated RNR1 through RNR5, in the p12 region of chromosomes 13, 14, 15, 21 and 22. Each rDNA unit encodes a 45S rRNA which serves as the precursor for an 18S, 5.8S and 28S rRNA. The number of rDNA repeating units varies between individuals and from chromosome to chromosome, although usually 30 to 40 repeats are found on each chromosome. This ribosomal repeating unit located on chromosome 13 is not currently annotated on the reference genome. [provided by RefSeq, Mar 2009]

GeneCards Summary for RNR1 Gene

RNR1 (RNA, Ribosomal Cluster 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with RNR1 include idiopathic bilateral vestibulopathy and nonsyndromic hearing loss and deafness, mitochondrial. Among its related pathways are Viral mRNA Translation.

Gene Wiki entry for RNR1 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNR1 Gene

Genomics for RNR1 Gene

Genomic Location for RNR1 Gene

Unknown strand

Genomic View for RNR1 Gene

Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements and RefSeq DNA sequence for RNR1 Gene

Proteins for RNR1 Gene

Post-translational modifications for RNR1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNR1 Gene

Domains & Families for RNR1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNR1 Gene

Function for RNR1 Gene

Molecular function for RNR1 Gene

GENATLAS Biochemistry:
RNA,ribosomal cluster 1

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNR1 Gene

Localization for RNR1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNR1 Gene

Pathways & Interactions for RNR1 Gene

genes like me logo Genes that share pathways with RNR1: view

Pathways by source for RNR1 Gene

1 GeneGo (Thomson Reuters) pathway for RNR1 Gene

Interacting Proteins for RNR1 Gene

Gene Ontology (GO) - Biological Process for RNR1 Gene


No data available for SIGNOR curated interactions for RNR1 Gene

Drugs & Compounds for RNR1 Gene

No Compound Related Data Available

Transcripts for RNR1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNR1 Gene

No ASD Table

Relevant External Links for RNR1 Gene

ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for RNR1 Gene

Expression for RNR1 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNR1 Gene

Orthologs for RNR1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for RNR1 Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia mt-Rnr1 16
Species with no ortholog for RNR1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for RNR1 Gene

Paralogs for RNR1 Gene

No data available for Paralogs for RNR1 Gene

Variants for RNR1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for RNR1 Gene

Disorders for RNR1 Gene

MalaCards: The human disease database

(4) MalaCards diseases for RNR1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
idiopathic bilateral vestibulopathy
nonsyndromic hearing loss and deafness, mitochondrial
  • nonsyndromic deafness and hearing loss, maternally-inherited
congenital cytomegalovirus
  • fetal cytomegalovirus syndrome
nonsyndromic hearing loss and deafness
- elite association
Search RNR1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for RNR1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with RNR1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for RNR1 Gene

Publications for RNR1 Gene

  1. Mitochondrial 12S rRNA variants in 1642 Han Chinese pediatric subjects with aminoglycoside-induced and nonsyndromic hearing loss. (PMID: 20100600) Lu J. … Guan M.X. (Mitochondrion 2010) 67
  2. Extensive and rapid screening for major mitochondrial DNA point mutations in patients with hereditary hearing loss. (PMID: 20111055) Kato T. … Tanaka M. (J. Hum. Genet. 2010) 67
  3. Genetic mutations and aminoglycoside-induced ototoxicity in neonates. (PMID: 20416460) Johnson R.F. … Greinwald J.H. (Otolaryngol Head Neck Surg 2010) 67
  4. Mutation analysis of mitochondrial 12S rRNA gene in Polish patients with non-syndromic and aminoglycoside-induced hearing loss. (PMID: 20353758) Rydzanicz M. … Szyfter K. (Biochem. Biophys. Res. Commun. 2010) 67
  5. Extensive screening system using suspension array technology to detect mitochondrial DNA point mutations. (PMID: 20064630) Nishigaki Y. … Tanaka M. (Mitochondrion 2010) 67

Products for RNR1 Gene

Sources for RNR1 Gene

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