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Aliases for RNPS1P1 Gene

Aliases for RNPS1P1 Gene

  • RNA Binding Protein With Serine Rich Domain 1 Pseudogene 1 2 3 5
  • RNA Binding Protein S1, Serine-Rich Domain Pseudogene 1 2

External Ids for RNPS1P1 Gene

Previous GeneCards Identifiers for RNPS1P1 Gene

  • GC00U932667
  • GC04P011372
  • GC04P011378
  • GC04P011383
  • GC04P011389
  • GC04P011385
  • GC04P011391
  • GC04P011486
  • GC04P011509

Summaries for RNPS1P1 Gene

GeneCards Summary for RNPS1P1 Gene

RNPS1P1 (RNA Binding Protein With Serine Rich Domain 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNPS1P1 Gene

Genomics for RNPS1P1 Gene

Regulatory Elements for RNPS1P1 Gene

Enhancers for RNPS1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F010655 0.8 ENCODE 10.4 -712.7 -712730 1.9 SIX4 JUN RAD21 GATA3 CTBP1 FOSL2 FOS CREM ZNF680 BHLHE40 RNPS1P1 ENSG00000261490 ENSG00000249334 LOC105374480
GH04F010657 0.6 ENCODE 10.4 -711.6 -711640 0.2 SIX4 DPF2 GATAD2B RAD21 ZNF217 CTBP1 GATA3 CUX1 RNPS1P1 ENSG00000249334 LOC105374480
GH04F011367 0.4 Ensembl 0.8 -1.2 -1221 0.4 RNPS1P1 LOC105374487
GH04F011339 0.8 ENCODE 0.3 -29.2 -29181 0.4 MTA2 IKZF1 MAFK ATF2 HS3ST1 RNPS1P1 LOC105374487
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNPS1P1 on UCSC Golden Path with GeneCards custom track

Promoters for RNPS1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001857721 379 1200

Genomic Location for RNPS1P1 Gene

Chromosome:
4
Start:
11,368,821 bp from pter
End:
11,373,749 bp from pter
Size:
4,929 bases
Orientation:
Plus strand

Genomic View for RNPS1P1 Gene

Genes around RNPS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNPS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNPS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNPS1P1 Gene

Proteins for RNPS1P1 Gene

Post-translational modifications for RNPS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNPS1P1 Gene

Domains & Families for RNPS1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNPS1P1 Gene

Function for RNPS1P1 Gene

Phenotypes for RNPS1P1 Gene

GenomeRNAi human phenotypes for RNPS1P1:
genes like me logo Genes that share phenotypes with RNPS1P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNPS1P1 Gene

Localization for RNPS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNPS1P1 Gene

Pathways & Interactions for RNPS1P1 Gene

SuperPathways for RNPS1P1 Gene

No Data Available

Interacting Proteins for RNPS1P1 Gene

Gene Ontology (GO) - Biological Process for RNPS1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNPS1P1 Gene

Transcripts for RNPS1P1 Gene

mRNA/cDNA for RNPS1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNPS1P1 Gene

No ASD Table

Relevant External Links for RNPS1P1 Gene

GeneLoc Exon Structure for
RNPS1P1
ECgene alternative splicing isoforms for
RNPS1P1

Expression for RNPS1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNPS1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNPS1P1 Gene:

RNPS1P1
genes like me logo Genes that share expression patterns with RNPS1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNPS1P1 Gene

Orthologs for RNPS1P1 Gene

Evolution for RNPS1P1 Gene

ENSEMBL:
Gene Tree for RNPS1P1 (if available)
TreeFam:
Gene Tree for RNPS1P1 (if available)

No data available for Orthologs for RNPS1P1 Gene

Paralogs for RNPS1P1 Gene

No data available for Paralogs for RNPS1P1 Gene

Variants for RNPS1P1 Gene

Relevant External Links for RNPS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNPS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNPS1P1 Gene

Disorders for RNPS1P1 Gene

No disorders were found for RNPS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNPS1P1 Gene

Publications for RNPS1P1 Gene

  1. Generation of a transcriptional map for a 700-kb region surrounding the polycystic kidney disease type 1 (PKD1) and tuberous sclerosis type 2 (TSC2) disease genes on human chromosome 16p3.3. (PMID: 8828041) Burn T.C. … Landes G.M. (Genome Res. 1996) 3 64

Products for RNPS1P1 Gene

Sources for RNPS1P1 Gene

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