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Aliases for RNF6P1 Gene

Aliases for RNF6P1 Gene

  • Ring Finger Protein 6 Pseudogene 1 2 3 5
  • Ring Finger Protein (C3H2C3 Type) 6 Pseudogene 1 2

External Ids for RNF6P1 Gene

Previous GeneCards Identifiers for RNF6P1 Gene

  • GC21M040747

Summaries for RNF6P1 Gene

GeneCards Summary for RNF6P1 Gene

RNF6P1 (Ring Finger Protein 6 Pseudogene 1) is a Pseudogene.

Additional gene information for RNF6P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF6P1 Gene

Genomics for RNF6P1 Gene

Regulatory Elements for RNF6P1 Gene

Enhancers for RNF6P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H038983 2.5 VISTA FANTOM5 Ensembl ENCODE dbSUPER 14.6 +387.6 387642 11 PKNOX1 FOXA2 MLX ARNT ARID4B YBX1 FEZF1 ZNF2 ZNF766 CBX5 HMGN1 RNF6P1 MYL6P2 DSCR10 LOC100288590 DSCR4 DSCR4-IT1 DSCR8 ETS2 ENSG00000235888
GH21H038906 2 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +465.6 465637 9 HDGF PKNOX1 FOXA2 MLX SIN3A YBX1 ZBTB7B YY1 ZNF302 ZNF207 HMGN1 LCA5L RNF6P1 DSCR4 MYL6P2 DSCR10 LOC100288590 DSCR4-IT1 PSMG1 DSCR8
GH21H038733 1.4 Ensembl ENCODE dbSUPER 14.6 +641.8 641795 3 RB1 TBL1XR1 ZSCAN4 ARID4B ZNF2 RAD21 RARA RFX5 ZNF143 RCOR1 RNF6P1 DSCR4 DSCR10 LOC100288590 MYL6P2 DSCR4-IT1 ERG RPSAP64 DSCR8 KCNJ6
GH21H039311 1.2 ENCODE 14.8 +63.6 63588 3 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 SP3 NFYC HMGN1 PSMG1 WRB RNF6P1 MYL6P2 BRWD1 LCA5L BRWD1-AS1 SH3BGR BRWD1-AS2
GH21H039181 1.1 ENCODE 14.6 +193.6 193640 3 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B HMGN1 PSMG1 RNF6P1 MYL6P2 DSCR10 LOC100288590 WRB BRWD1 SH3BGR PCBP2P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNF6P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNF6P1 Gene

Chromosome:
21
Start:
39,373,763 bp from pter
End:
39,377,066 bp from pter
Size:
3,304 bases
Orientation:
Minus strand

Genomic View for RNF6P1 Gene

Genes around RNF6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNF6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNF6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF6P1 Gene

Proteins for RNF6P1 Gene

Post-translational modifications for RNF6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF6P1 Gene

Domains & Families for RNF6P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNF6P1 Gene

Function for RNF6P1 Gene

Phenotypes From GWAS Catalog for RNF6P1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNF6P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNF6P1 Gene

Localization for RNF6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNF6P1 Gene

Pathways & Interactions for RNF6P1 Gene

SuperPathways for RNF6P1 Gene

No Data Available

Interacting Proteins for RNF6P1 Gene

Gene Ontology (GO) - Biological Process for RNF6P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNF6P1 Gene

Drugs & Compounds for RNF6P1 Gene

No Compound Related Data Available

Transcripts for RNF6P1 Gene

mRNA/cDNA for RNF6P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNF6P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RNF6P1 Gene

No ASD Table

Relevant External Links for RNF6P1 Gene

GeneLoc Exon Structure for
RNF6P1
ECgene alternative splicing isoforms for
RNF6P1

Expression for RNF6P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNF6P1 Gene

mRNA differential expression in normal tissues according to GTEx for RNF6P1 Gene

This gene is overexpressed in Testis (x32.8) and Liver (x11.4).

NURSA nuclear receptor signaling pathways regulating expression of RNF6P1 Gene:

RNF6P1
genes like me logo Genes that share expression patterns with RNF6P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNF6P1 Gene

Orthologs for RNF6P1 Gene

Evolution for RNF6P1 Gene

ENSEMBL:
Gene Tree for RNF6P1 (if available)
TreeFam:
Gene Tree for RNF6P1 (if available)

No data available for Orthologs for RNF6P1 Gene

Paralogs for RNF6P1 Gene

No data available for Paralogs for RNF6P1 Gene

Variants for RNF6P1 Gene

Relevant External Links for RNF6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNF6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNF6P1 Gene

Disorders for RNF6P1 Gene

No disorders were found for RNF6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNF6P1 Gene

Publications for RNF6P1 Gene

No publications were found for RNF6P1 Gene.

Products for RNF6P1 Gene

Sources for RNF6P1 Gene

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