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Aliases for RNF5P1 Gene

Aliases for RNF5P1 Gene

  • Ring Finger Protein 5, E3 Ubiquitin Protein Ligase Pseudogene 1 2 3
  • Ring Finger Protein 5 Pseudogene 1 2

External Ids for RNF5P1 Gene

Previous GeneCards Identifiers for RNF5P1 Gene

  • GC00U921549
  • GC08M038457
  • GC08M036992

Summaries for RNF5P1 Gene

GeneCards Summary for RNF5P1 Gene

RNF5P1 (Ring Finger Protein 5, E3 Ubiquitin Protein Ligase Pseudogene 1) is a Pseudogene.

Gene Wiki entry for RNF5P1 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF5P1 Gene

Genomics for RNF5P1 Gene

Regulatory Elements for RNF5P1 Gene

Genomic Location for RNF5P1 Gene

38,600,173 bp from pter
38,601,257 bp from pter
1,085 bases
Minus strand

Genomic View for RNF5P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNF5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF5P1 Gene

Proteins for RNF5P1 Gene

Post-translational modifications for RNF5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF5P1 Gene

Domains for RNF5P1 Gene

Gene Families for RNF5P1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNF5P1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNF5P1 Gene

Function for RNF5P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNF5P1 Gene

Localization for RNF5P1 Gene

Subcellular locations from

Jensen Localization Image for RNF5P1 Gene COMPARTMENTS Subcellular localization image for RNF5P1 gene
Compartment Confidence
nucleus 3
cytosol 2
peroxisome 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RNF5P1 Gene

Pathways for RNF5P1 Gene

SuperPathways for RNF5P1 Gene

No Data Available

Interacting Proteins for RNF5P1 Gene

Gene Ontology (GO) - Biological Process for RNF5P1 Gene


No data available for Pathways by source for RNF5P1 Gene

Transcripts for RNF5P1 Gene

mRNA/cDNA for RNF5P1 Gene

(1) Additional mRNA sequences :
(27) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RNF5P1 Gene

Ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RNF5P1 Gene

No ASD Table

Relevant External Links for RNF5P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNF5P1 Gene

mRNA expression in normal human tissues for RNF5P1 Gene

SOURCE GeneReport for Unigene cluster for RNF5P1 Gene Hs.512071

genes like me logo Genes that share expressions with RNF5P1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for RNF5P1 Gene

Orthologs for RNF5P1 Gene

Evolution for RNF5P1 Gene

Gene Tree for RNF5P1 (if available)
Gene Tree for RNF5P1 (if available)

No data available for Orthologs for RNF5P1 Gene

Paralogs for RNF5P1 Gene

No data available for Paralogs for RNF5P1 Gene

Variants for RNF5P1 Gene

Sequence variations from dbSNP and Humsavar for RNF5P1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs15078 -- 38,600,240(+) GTGAG(A/G)GGGAG nc-transcript-variant
rs327932 -- 38,599,719(+) atttt(A/G)ttatt downstream-variant-500B
rs327933 -- 38,600,591(+) GAGTA(A/C)GGAAG nc-transcript-variant
rs327934 -- 38,601,141(+) CCCGC(C/T)CCGCC nc-transcript-variant
rs327935 -- 38,601,284(+) CCAAG(A/C)CGCTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RNF5P1 Gene

Variant ID Type Subtype PubMed ID
dgv1929e1 CNV Complex 17122850
nsv830629 CNV Loss 17160897
nsv884706 CNV Loss 21882294
nsv884707 CNV Loss 21882294
esv24778 CNV Loss 19812545
nsv831295 CNV Gain+Loss 17160897

Relevant External Links for RNF5P1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RNF5P1 Gene

Disorders for RNF5P1 Gene

Relevant External Links for RNF5P1

Genetic Association Database (GAD)

No disorders were found for RNF5P1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for RNF5P1 Gene

Publications for RNF5P1 Gene

  1. Genome-wide association study of pancreatic cancer in Japanese population. (PMID: 20686608) Low S.K. … Sakamoto H. (PLoS ONE 2010) 3 48
  2. Cloning, expression and mapping of a novel RING-finger gene (RNF5), a human homologue of a putative zinc-finger gene from Caenorhabditis elegans. (PMID: 9533025) Kyushiki H. … Horie M. (Cytogenet. Cell Genet. 1997) 3
  3. Rma1, a novel type of RING finger protein conserved from Arabidopsis to human, is a membrane-bound ubiquitin ligase. (PMID: 11329381) Matsuda N. … Nakano A. (J. Cell Sci. 2001) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. RNF5, a RING finger protein that regulates cell motility by targeting paxillin ubiquitination and altered localization. (PMID: 12861019) Didier C. … Ronai Z. (Mol. Cell. Biol. 2003) 3

Products for RNF5P1 Gene

Sources for RNF5P1 Gene

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