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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RNF4 Gene

protein-coding   GIFtS: 57
GCID: GC04P002463

ring finger protein 4

 Explore 7 diseases affiliated with
RNF4 via our new
 Human Malady Compendium 
Biological research products
for RNF4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ring Finger Protein 41 2 3     E3 Ubiquitin Ligase RNF42
SNURF1 2 3     E3 Ubiquitin-Protein Ligase RNF42
SLX51 2     EC 6.3.2.-3
Small Nuclear Ring Finger Protein2 3     Protein SNURF3
RES4-261     

External Ids:    HGNC: 100671   Entrez Gene: 60472   Ensembl: ENSG000000639787   OMIM: 6028505   UniProtKB: P783173   

Export aliases for RNF4 gene to outside databases

Previous GC identifers: GC04P002465 GC04P002337 GC04P002432 GC04P002438 GC04P002410


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RNF4:
The protein encoded by this gene contains a RING finger motif and acts as a transcription regulator. This protein has
been shown to interact with, and inhibit the activity of, TRPS1, a transcription suppressor of GATA-mediated
transcription. Transcription repressor ZNF278/PATZ is found to interact with this protein, and thus reduce the
enhancement of androgen receptor-dependent transcription mediated by this protein. Studies of the mouse and rat
counterparts suggested a role of this protein in spermatogenesis. A pseudogene of this gene is found on chromosome
1.(provided by RefSeq, Jul 2010)

UniProtKB/Swiss-Prot: RNF4_HUMAN, P78317
Function: E3 ubiquitin-protein ligase which binds polysumoylated chains covalently attached to proteins and mediates
'Lys-6'-, 'Lys-11'-, 'Lys-48'- and 'Lys-63'-linked polyubiquitination of those substrates and their subsequent
targeting to the proteasome for degradation. Regulates the degradation of several proteins including PML and the
transcriptional activator PEA3. Involved in chromosome alignment and spindle assembly, it regulates the kinetochore
CENPH-CENPI-CENPK complex by targeting polysumoylated CENPI to proteasomal degradation. Regulates the cellular
responses to hypoxia and heat shock through degradation of respectively EPAS1 and PARP1. Alternatively, it may also
bind DNA/nucleosomes and have a more direct role in the regulation of transcription for instance enhancing basal
transcription and steroid receptor-mediated transcriptional activation

Gene Wiki entry for RNF4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_006051.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RNF4 gene promoter:
         HEN1   PPAR-gamma1   NF-1   Nkx6-1   Pax-2   HNF-4alpha2   PPAR-gamma2   Pax-2a   HNF-4alpha1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidRNF4 promoter sequence
   Search SABiosciences Chromatin IP Primers for RNF4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RNF4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4p16.3   Ensembl cytogenetic band:  4p16.3   HGNC cytogenetic band: 4p16.3

RNF4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RNF4 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04P002463:  view genomic region     (about GC identifiers)

Start:
2,463,947 bp from pter      End:
2,627,047 bp from pter
Size:
163,101 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RNF4_HUMAN, P78317 (See protein sequence)
Recommended Name: E3 ubiquitin-protein ligase RNF4  
Size: 190 amino acids; 21319 Da
Subunit: Homodimer (via RING-type zinc finger domain). Interacts with GSC2 (By similarity). Interacts with AR/the
androgen receptor and TBP (By similarity). Interacts with TCF20 (By similarity). Interacts with PATZ1. Interacts with
TRPS1; negatively regulates TRPS1 transcriptional repressor activity. Interacts with PML; SUMO1-dependent. Interacts
with PML; SUMO2-dependent. Interacts with PARP1
Subcellular location: Cytoplasm. Nucleus. Nucleus, PML body. Nucleus, nucleoplasm
2 PDB 3D structures from and Proteopedia for RNF4:
2EA6 (3D)        2XEU (3D)    
Secondary accessions: B2R6D6 D6RF58 Q49AR8
Alternative splicing: 2 isoforms:  P78317-1   P78317-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for RNF4: NX_P78317

Post-translational modifications:

  • Sumoylated; conjugated by one or two SUMO1 moieties (By similarity)1
  • Autoubiquitinated (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P78317

  • RNF4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_001171938.1  NP_001171939.1  NP_002929.1  

    ENSEMBL proteins: 
     ENSP00000423186   ENSP00000425667   ENSP00000315212   ENSP00000423100   ENSP00000422728  
     ENSP00000422500   ENSP00000425724   ENSP00000422938   ENSP00000426615   ENSP00000424076  
     ENSP00000426503   ENSP00000422619   ENSP00000427212   ENSP00000446369  
    Reactome Protein details: P78317
    Human Recombinant Protein Products: 
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    Uscn Proteins for RNF4

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA12885770
    GO:0005654nucleoplasm ----
    GO:0005737cytoplasm IDA12885770
    GO:0015630microtubule cytoskeleton IDA--
    GO:0016605colocalizes with PML body IDA--


    RNF4 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    RNF4 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR017907 Znf_RING_CS
     IPR001841 Znf_RING
     IPR013083 Znf_RING/FYVE/PHD

    Graphical View of Domain Structure for InterPro Entry P78317

    ProtoNet protein and cluster: P78317

    1 Blocks protein family: IPB001841 Zn-finger

    UniProtKB/Swiss-Prot: RNF4_HUMAN, P78317
    Domain: The RING-type zinc finger domain is required for the ubiquitination of polysumoylated substrates (By
    similarity)
    Similarity: Contains 1 RING-type zinc finger


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: RNF4_HUMAN, P78317
    Function: E3 ubiquitin-protein ligase which binds polysumoylated chains covalently attached to proteins and mediates
    'Lys-6'-, 'Lys-11'-, 'Lys-48'- and 'Lys-63'-linked polyubiquitination of those substrates and their subsequent
    targeting to the proteasome for degradation. Regulates the degradation of several proteins including PML and the
    transcriptional activator PEA3. Involved in chromosome alignment and spindle assembly, it regulates the kinetochore
    CENPH-CENPI-CENPK complex by targeting polysumoylated CENPI to proteasomal degradation. Regulates the cellular
    responses to hypoxia and heat shock through degradation of respectively EPAS1 and PARP1. Alternatively, it may also
    bind DNA/nucleosomes and have a more direct role in the regulation of transcription for instance enhancing basal
    transcription and steroid receptor-mediated transcriptional activation

         Genatlas biochemistry entry for RNF4:
    RING finger protein 4,abundantly expressed in fetal tissues,involved in the protein and DNA association in the nucleus
    of the cell

    Enzyme Number (IUBMB): EC 6.3.2.-1

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    Gene Ontology (GO): 5/13 molecular function terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding ISS--
    GO:0003700sequence-specific DNA binding transcription factor activity TAS9710597
    GO:0003713transcription coactivator activity NAS15572661
    GO:0004842ubiquitin-protein ligase activity ISS--
    GO:0005515protein binding IPI--


    RNF4 for ontologies           About GeneDecksing


    Animal Models:
         3 MGI mutant phenotypes (inferred from 1 allele(MGI details for Rnf4):
     cardiovascular system  cellular  mortality/aging 

    RNF4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Antigen processing: Ubiquitination & Proteasome degradation
    Antigen processing: Ubiquitination & Proteasome degradation1.00
    Polyubiquitination of substrate0.75
    Class I MHC mediated antigen processing & presentation0.83
    2Immune System
    Immune System1.00
    Adaptive Immune System0.59
    3Androgen receptor signaling pathway
    Androgen receptor signaling pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for RNF4 
        Androgen receptor signaling pathway

    5        Reactome Pathways for RNF4
        Antigen processing: Ubiquitination & Proteasome degradation
    Polyubiquitination of substrate
    Adaptive Immune System
    Class I MHC mediated antigen processing & presentation
    Immune System


    UniProtKB/Swiss-Prot: RNF4_HUMAN, P78317
    Pathway: Protein modification; protein ubiquitination


    RNF4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RNF4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/74 Interacting proteins for RNF4 (P783172, 3 ENSP000003152124) via UniProtKB, MINT, STRING, and/or I2D (see all 74)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    SKILP127572, 3MINT-61655 I2D: score=2 
    TRPS1Q9UHF72, 3, ENSP000003790654MINT-19194 MINT-19195 MINT-19193 I2D: score=2 STRING: ENSP00000379065
    NFATC2IPQ8NCF52, 3, ENSP000003247924MINT-6169194 I2D: score=1 STRING: ENSP00000324792
    PARP1P098742, 3, ENSP000003557594MINT-7986354 I2D: score=1 STRING: ENSP00000355759
    ARP102753, ENSP000003638224I2D: score=3 STRING: ENSP00000363822
    About this table

    Gene Ontology (GO): 5/15 biological process terms (GO ID links to tree view) (see all 15):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent ----
    GO:0016567protein ubiquitination ----
    GO:0030521androgen receptor signaling pathway NAS15572661
    GO:0043161proteasomal ubiquitin-dependent protein catabolic process IMP--


    RNF4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    RNF4 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for RNF4
    4 Novoseek chemical compound relationships for RNF4 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    steroid 46.1 12 9710597 (3), 11696545 (2), 10617653 (2), 12885770 (1)
    zinc 39.4 5 11696545 (1), 10617653 (1), 9710597 (1)
    testosterone 37.7 8 10617653 (3), 9710597 (2)
    estrogen 13.3 5 11696545 (3), 14749358 (1)

    Search CenterWatch for drugs/clinical trials and news about RNF4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RNF4 gene (3 alternative transcripts): 
    NM_001185009.2  NM_001185010.2  NM_002938.4  

    Unigene Cluster for RNF4:

    Ring finger protein 4
    Hs.740360  [show with all ESTs]
    Unigene Representative Sequence: AK128038
    18/22 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 22):
    ENST00000503659 ENST00000504224 ENST00000314289(uc003gfb.3 uc010icj.3 uc003gfc.3)
    ENST00000502316 ENST00000509388 ENST00000507247 ENST00000509258(uc010ici.2)
    ENST00000511843 ENST00000504782 ENST00000513284 ENST00000507784 ENST00000513578
    ENST00000511892 ENST00000511859 ENST00000513643 ENST00000503123 ENST00000509206
    ENST00000506706

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    hsa-miR-3678-3p hsa-miR-607 hsa-miR-106a hsa-miR-146a hsa-miR-200a hsa-miR-25 hsa-miR-3921 hsa-miR-650
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    Additional cDNA sequence: 

    AB000468.1 AK128038.1 AK307372.1 AK309509.1 AK311314.1 AK312534.1 BC031935.1 U95140.1 

    24/25 DOTS entries (see all 25):

    DT.102824075  DT.418598  DT.99971300  DT.91670644  DT.91664071  DT.100793341  DT.40296901  DT.101984117 
    DT.95358974  DT.95358952  DT.121265842  DT.95118554  DT.100793343  DT.121265873  DT.91844988  DT.100793346 
    DT.86843942  DT.91849839  DT.95358946  DT.95358956  DT.121265806  DT.121265809  DT.92063829  DT.99994002 

    24/389 AceView cDNA sequences (see all 389):

    AU142773 BE275366 BE794591 CD655098 AU129999 BP354232 CD692446 BE697299 
    NM_002938 BP354272 CD656564 AA341612 BM785711 BG754096 AU130671 BM918597 
    AU129764 BU507746 BM479841 AA449395 BX462495 BM763930 D44752 BQ674461 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for RNF4 (see all 6)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b · 9c
    SP1:                                            -                                                               
    SP2:                                            -                                                               
    SP3:                                      -     -     -     -     -     -     -                                 
    SP4:                                                                                                            
    SP5:                                                                                                            


    ECgene alternative splicing isoforms for RNF4

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RNF4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GATATCAGTC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See RNF4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RNF4

    SOURCE GeneReport for Unigene cluster: Hs.740360

    UniProtKB/Swiss-Prot: RNF4_HUMAN, P78317
    Tissue specificity: Widely expressed at low levels in many tissues; highly expressed in testis

        SABiosciences Expression via Pathway-Focused PCR Array including RNF4: 
              Ubiquitin Ligases in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RNF4 gene from 8/20 species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Rnf41 , 5 ring finger protein 41, 5 88.95(n)1
    91.44(a)1
      5 (17.87 cM)5
    198221  NM_011278.41  NP_035408.11 
     343363905 
    chicken
    (Gallus gallus)
    Aves RNF41 ring finger protein 4 70.37(n)
    70.9(a)
      422886  NM_001012889.1  NP_001012907.1 
    lizard
    (Anolis carolinensis)
    Reptilia --
    RNF46
    --
    61(a)
    46(a)
    1 ↔ 1
    possible ortholog
    4(29465949-29466539)
    1(76118998-76119564)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.57942 Xenopus laevis transcribed sequence with weak similarity more 74.41(n)    BX851871.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.173032 Danio rerio, clone IMAGE5914563, mRNA 72.79(n)    BC049485.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG430586
    elfless6
    (see all 3)
    elfless
    (see all 3)
    25(a)
    12(a)
    (see all 3)
    many → 1
    many → 1
    (see all 3)
    2R(9488215-9488517)
    2L(18009643-18011475)
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT3G072006
    AT5G486556
    RING/U-box domain-containing protein
    23(a)
    17(a)
    many → 1
    many → 1
    3(2290762-2292492)
    5(19731150-19733043)
    rice
    (Oryza sativa)
    Liliopsida --
    --
    zinc finger, C3HC4 type domain containing protein,...
    zinc finger, C3HC4 type domain containing protein,...
    19(a)
    18(a)
    many → 1
    many → 1
    9(19502940-19506575)
    1(40114864-40120071)


    ENSEMBL Gene Tree for RNF4 (if available)
    TreeFam Gene Tree for RNF4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RNF4 gene
    4 SIMAP similar genes for RNF4 using alignment to 11 protein entries:     RNF4_HUMAN (see all proteins):
    PCGF3    RFWD2    RNF166    TRIM5

    RNF4 for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for RNF4
    PGOHUM00000247103 PGOHUM00000245250


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 3 variations for RNF4
         3 Indels: 68624 42809 34340
    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RNF4
    DNA2.0 Custom Variant and Variant Library Synthesis for RNF4

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    RNF4 for disorders           About GeneDecksing

    OMIM gene information: 602850    OMIM disorders: --

    7 diseases for RNF4:    About MalaCards
    testicular germ cell cancer    testicular neoplasm    germ cell cancer    huntington's disease
    breast cancer    hypoxia    leukemia

    Human Genome Epidemiology (HuGE) Navigator: RNF4 (1 document)

    Export disorders for RNF4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RNF4 gene, integrated from 9 sources (see all 52):
    (articles sorted by number of sources associating them with RNF4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification and characterization of a novel RING-finger gene (RNF4) mapping at 4p16.3. (PubMed id 9479498)1, 2, 3 Chiariotti L.... Bruni C.B. (1998)
    2. SUMO-1 promotes association of SNURF (RNF4) with PML nuclear bodies. (PubMed id 15707587)1, 2, 9 Hakli M....Palvimo J.J. (2005)
    3. The RING finger protein RNF4, a co-regulator of transcription, interacts with the TRPS1 transcription factor. (PubMed id 12885770)1, 2, 9 Kaiser F.J....Ludecke H.J. (2003)
    4. RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation. (PubMed id 18408734)1, 2, 9 Tatham M.H....Hay R.T. (2008)
    5. Arsenic-induced SUMO-dependent recruitment of RNF4 into PML nuclear bodies. (PubMed id 20943951)1, 2 Geoffroy M.C.... Hay R.T. (2010)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. A novel member of the BTB/POZ family, PATZ, associates with the RNF4 RING finger protein and acts as a transcriptional repressor. (PubMed id 10713105)1, 2 Fedele M....Chiatiotti L. (2000)
    8. The primary structure and genomic organization of five novel transcripts located close to the Huntington's disease gene on human chromosome 4p16.3. (PubMed id 9734812)1, 2 Hadano S.... Ikeda J.-E. (1998)
    9. Coregulator small nuclear RING finger protein (SNURF) enhances Sp1- and steroid receptor-mediated transcription by different mechanisms. (PubMed id 10617653)1, 9 Poukka H....Palvimo J.J. (2000)
    10. Cooperative coactivation of estrogen receptor alpha in ZR-75 human breast cancer cells by SNURF and TATA-binding protein. (PubMed id 11696545)1, 9 Saville B....Safe S. (2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6047 HGNC: 10067 AceView: RNF4 Ensembl:ENSG00000063978 euGenes: HUgn6047
    ECgene: RNF4 H-InvDB: RNF4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RNF4 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for RNF4 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RNF4 gene:
    Search GeneIP for patents involving RNF4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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     Regulatory tfbs in RNF4 promoter
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