Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 



RNF39 Gene

protein-coding   GIFtS: 49
GCID: GC06M030038

Ring Finger Protein 39

  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

TryGeneCards Plus

Aliases
Ring Finger Protein 391 2
HZFW2 3 5
Protein HZFw2 3
HZF2 5
LIRF2 5
LTP (Long-Term Potentiation) Induced RING Finger Protein2

External Ids:    HGNC: 180641   Entrez Gene: 803522   Ensembl: ENSG000002046187   OMIM: 6075245   UniProtKB: Q9H2S53   

Export aliases for RNF39 gene to outside databases

Previous GC identifers: GC06M029808 GC06M030144 GC06M030146 GC06M029837


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

TryGeneCards Plus

Entrez Gene summary for RNF39 Gene:
This gene lies within the major histocompatibility complex class I region on chromosome 6. Studies of a similar
rat protein suggest that this gene encodes a protein that plays a role in an early phase of synaptic plasticity.
Multiple transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul
2008)

GeneCards Summary for RNF39 Gene:
RNF39 (ring finger protein 39) is a protein-coding gene. Diseases associated with RNF39 include behcet's disease, and systemic lupus erythematosus.

UniProtKB/Swiss-Prot: RNF39_HUMAN, Q9H2S5
Function: May play a role in prolonged long term-potentiation (LTP) maintenance (By similarity)

Gene Wiki entry for RNF39 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
About This Section

TryGeneCards Plus
RefSeq DNA sequence:
NC_000006.12  NC_018917.2  NT_007592.16  NT_113891.3  NT_167244.2  NT_167245.2  NT_167246.2  NT_167247.2  
NT_167248.2  NT_167249.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the RNF39 gene promoter:
         NF-AT4   NF-AT2   GATA-3   RREB-1   Bach2   NF-AT3   AP-4   NF-AT1   NF-AT   RORalpha2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidRNF39 promoter sequence
   Search Chromatin IP Primers for RNF39

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat RNF39


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.3   Ensembl cytogenetic band:  6p22.1   HGNC cytogenetic band: 6p21.3

RNF39 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RNF39 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M030038:  view genomic region     (about GC identifiers)

Start:
30,038,043 bp from pter      End:
30,043,664 bp from pter
Size:
5,622 bases      Orientation:
minus strand

Selected alternative locations (see all 7):
Chr6-,NT_113891.2 1,550,143-1,555,728      Chr6-,NT_167247 1,419,941-1,425,526      Chr6-,NT_167244 1,278,274-1,283,859     
Chr6-,NT_167246 1,336,636-1,342,221      Chr6-,NT_167245 1,331,767-1,337,352      Chr6-,NT_167248 1,331,022-1,336,602     

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
About This Section

TryGeneCards Plus

UniProtKB/Swiss-Prot: RNF39_HUMAN, Q9H2S5 (See protein sequence)
Recommended Name: RING finger protein 39  
Size: 420 amino acids; 45525 Da
Secondary accessions: A2BEK3 A6NCD6 B0S858 Q5SPM8 Q5SPM9 Q5SPN0 Q5SRJ9 Q5SRK1 Q5SS29 Q9H2S3
Q9H2S4
Alternative splicing: 3 isoforms:  Q9H2S5-1   Q9H2S5-2   Q9H2S5-3   (Ref.1 (AAG40630) sequence differs from that show due to a frameshift in position 237)

Explore the universe of human proteins at neXtProt for RNF39: NX_Q9H2S5

Explore proteomics data for RNF39 at MOPED


See RNF39 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

REFSEQ proteins (2 alternative transcripts): 
NP_079512.2  NP_739575.2  

ENSEMBL proteins: 
 ENSP00000365942   ENSP00000244360  

RNF39 Human Recombinant Protein Products:

Browse Purified and Recombinant Proteins at EMD Millipore
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
OriGene Purified Protein for RNF39
OriGene Protein Over-expression Lysate for RNF39
OriGene MassSpec for RNF39
OriGene Custom Protein Services for RNF39
GenScript Custom Purified and Recombinant Proteins Services for RNF39
Novus Biologicals RNF39 Proteins
Novus Biologicals RNF39 Lysate
Browse Sino Biological Recombinant Proteins
Browse Sino Biological Cell Lysates
Browse ProSpec Recombinant Proteins
Cloud-Clone Corp. Proteins for RNF39

RNF39 Antibody Products:

Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Browse R&D Systems for Antibodies
OriGene Antibodies for RNF39
OriGene Custom Antibody Services for RNF39
Novus Biologicals RNF39 Antibodies
Abcam antibodies for RNF39
Cloud-Clone Corp. Antibodies for RNF39
ThermoFisher Antibodies for RNF39
LSBio Antibodies in human, mouse, rat for RNF39

RNF39 Assay Products:

Browse Kits and Assays available from EMD Millipore
OriGene Custom Assay Services for RNF39
Browse R&D Systems for biochemical assays
GenScript Custom Assay Services for RNF39
Browse Enzo Life Sciences for kits & assays
Cloud-Clone Corp. ELISAs for RNF39
Cloud-Clone Corp. CLIAs for RNF39


(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

TryGeneCards Plus
HGNC Gene Families:
RNF: RING-type (C3HC4) zinc fingers

Selected InterPro protein domains (see all 8):
 IPR006574 PRY
 IPR017907 Znf_RING_CS
 IPR001841 Znf_RING
 IPR001870 B30.2/SPRY
 IPR003877 SPRY_rcpt

Graphical View of Domain Structure for InterPro Entry Q9H2S5

ProtoNet protein and cluster: Q9H2S5

3 Blocks protein domains:
IPB001841 Zn-finger
IPB003879 Butyrophylin C-terminal DUF signature
IPB006574 SPRY-associated domain


UniProtKB/Swiss-Prot: RNF39_HUMAN, Q9H2S5
Similarity: Contains 1 B30.2/SPRY domain
Similarity: Contains 1 RING-type zinc finger


RNF39 for domains           About GeneDecksing


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
About This Section

TryGeneCards Plus

Molecular Function:

     UniProtKB/Swiss-Prot Summary: RNF39_HUMAN, Q9H2S5
Function: May play a role in prolonged long term-potentiation (LTP) maintenance (By similarity)

     Gene Ontology (GO): 3 molecular function terms:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005515protein binding ----
GO:0008270zinc ion binding IEA--
GO:0046872metal ion binding ----
     
RNF39 for ontologies           About GeneDecksing


Phenotypes:
     1 GenomeRNAi human phenotype for RNF39:
 Decreased cilium length after  

Animal Models:
   inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for RNF39
   inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for RNF39

   genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for RNF39
   genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for RNF39

miRNA
Products:
    
Block miRNA regulation of human, mouse, rat RNF39 using miScript Target Protectors
8 qRT-PCR Assays for microRNAs that regulate RNF39:
hsa-miR-1273d hsa-miR-3152-3p hsa-miR-137 hsa-miR-29c hsa-miR-29a hsa-miR-767-5p hsa-miR-181a-2* hsa-miR-29b
SwitchGear 3'UTR luciferase reporter plasmidRNF39 3' UTR sequence
Inhib. RNA
Products:
    
OriGene RNAi products in human, mouse, rat for RNF39
Predesigned siRNA for gene silencing in human, mouse, rat RNF39

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for RNF39

Clone
Products:
     
OriGene clones in human, mouse for RNF39 (see all 12)
OriGene ORF clones in mouse, rat for RNF39
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript: all cDNA clones in your preferred vector (see all 2): RNF39 (NM_025236)
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for RNF39
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RNF39

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for RNF39
Browse ESI BIO Cell Lines and PureStem Progenitors for RNF39 
In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RNF39


(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
About This Section

TryGeneCards Plus

Subcellular locations from UniProtKB/Swiss-Prot
RNF39_HUMAN, Q9H2S5: Cytoplasm (By similarity)
Subcellular locations from COMPARTMENTS: 

CompartmentConfidence
nucleus3
cytosol2
mitochondrion1

Gene Ontology (GO): 2 cellular component terms:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005575cellular_component ND--
GO:0005737cytoplasm IEA--

RNF39 for ontologies           About GeneDecksing


(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
About This Section

TryGeneCards Plus



    Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for RNF39
Interactions:

    Search GeneGlobe Interaction Network for RNF39

STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

1 Interacting protein for RNF39 (ENSP000002443604) via UniProtKB, MINT, STRING, and/or I2D
InteractantInteraction Details
GeneCardExternal ID(s)
PPP1CBENSP000002961224STRING: ENSP00000296122
About this table

Gene Ontology (GO): 1 biological process term:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0008150biological_process ND--

RNF39 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
About This Section

TryGeneCards Plus
Browse Small Molecules at EMD Millipore
   Browse drugs & compounds from Enzo Life Sciences
  Browse compounds at ApexBio 

Browse Tocris compounds for RNF39



(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
About This Section

TryGeneCards Plus

REFSEQ mRNAs for RNF39 gene (3 alternative transcripts): 
NM_170770.1  NM_025236.3  NM_170769.2  

Unigene Cluster for RNF39:

Ring finger protein 39
Hs.121178  [show with all ESTs]
Unigene Representative Sequence: NM_025236
2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000376751 ENST00000244360(uc003npd.3 uc003npe.3)
miRNA
Products:
     
Block miRNA regulation of human, mouse, rat RNF39 using miScript Target Protectors
8 qRT-PCR Assays for microRNAs that regulate RNF39:
hsa-miR-1273d hsa-miR-3152-3p hsa-miR-137 hsa-miR-29c hsa-miR-29a hsa-miR-767-5p hsa-miR-181a-2* hsa-miR-29b
SwitchGear 3'UTR luciferase reporter plasmidRNF39 3' UTR sequence
Inhib. RNA
Products:
     
OriGene RNAi products in human, mouse, rat for RNF39
Predesigned siRNA for gene silencing in human, mouse, rat RNF39
Clone
Products:
     
OriGene clones in human, mouse for RNF39 (see all 12)
OriGene ORF clones in mouse, rat for RNF39
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript: all cDNA clones in your preferred vector (see all 2): RNF39 (NM_025236)
DNA2.0 Custom Codon Optimized Gene Synthesis Service for RNF39
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RNF39
Primer
Products:
    
OriGene qSTAR qPCR primer pairs in human, mouse for RNF39
Pre-validated RT2 qPCR Primer Assay in human, mouse / rat RNF39
  QuantiTect SYBR Green Assays in human, mouse, rat RNF39
  QuantiFast Probe-based Assays in human, mouse, rat RNF39

Additional mRNA sequence: 

AF238315.1 AF238316.1 AF238317.1 

9 DOTS entries:

DT.421508  DT.446865  DT.121346035  DT.100879013  DT.65286602  DT.100879022  DT.121346122  DT.75189370 
DT.95165665 

Selected AceView cDNA sequences (see all 63):

NM_025236 BF590977 AV656507 BM875490 AI394569 NM_170769 AF238316 AI733730 
BX379955 AA086121 BM916380 BX388047 L19688 BX394689 BF432584 BX107891 
AF238315 BU179181 BI018772 AI784065 BM808012 BG386787 BM808118 BM711642 

GeneLoc Exon Structure


(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

TryGeneCards Plus

RNF39 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: ATTCCTACAT
RNF39 Expression
About this image


RNF39 expression in embryonic tissues and stem cells    About this table
Data from LifeMap, the Embryonic Development and Stem Cells Database
 selected tissues (see all 3) fully expand
 
 Blood (Hematopoietic System)
         Hematopoietic Stem Cells Hematopoietic Bone Marrow
 
 Thyroid (Endocrine System)
 
 Larynx (Respiratory System)
RNF39 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

RNF39 Protein Expression

SOURCE GeneReport for Unigene cluster: Hs.121178

UniProtKB/Swiss-Prot: RNF39_HUMAN, Q9H2S5
Tissue specificity: Expressed in testis

    Custom PCR Arrays for RNF39
Primer
Products:
OriGene qSTAR qPCR primer pairs in human, mouse for RNF39
Pre-validated RT2 qPCR Primer Assay in human, mouse / rat RNF39
QuantiTect SYBR Green Assays in human, mouse, rat RNF39
QuantiFast Probe-based Assays in human, mouse, rat RNF39
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RNF39

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

TryGeneCards Plus

This gene was present in the common ancestor of chordates.

Orthologs for RNF39 gene from Selected species (see all 7)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
mouse
(Mus musculus)
Mammalia Rnf391 , 5 ring finger protein 391, 5 82.48(n)1
83.24(a)1
  17 (19.16 cM)5
3864541  NM_001099632.11  NP_001093102.11 
 369429185 
lizard
(Anolis carolinensis)
Reptilia --
--
(see all 3)
Uncharacterized protein
(see all 3)
34(a)
30(a)
(see all 3)
1 ↔ many
1 ↔ many
(see all 3)
AAWZ02038782(4021-4584)
2(193646740-193647528)


ENSEMBL Gene Tree for RNF39 (if available)
TreeFam Gene Tree for RNF39 (if available)

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section

TryGeneCards Plus
Paralogs for RNF39 gene
2 SIMAP similar genes for RNF39 using alignment to 2 protein entries:     RNF39_HUMAN (see all proteins):
HCGV    TRIM39

RNF39 for paralogs           About GeneDecksing



(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
About This Section

TryGeneCards Plus

Selected SNPs for RNF39 (see all 196)    About this table    
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 6 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs92612901,2
C,F,H--30038647(+) TGTAGT/CAGCTG 2 -- ut31 ese324Minor allele frequency- C:0.05NS EA NA EU 3054
rs1397526071,2
C--30038708(+) GAGCAA/GGGACG 2 -- ut310--------
rs92612911,2
C,F,H--30038712(+) AGGGAC/TGTGGA 2 -- ut31 ese312Minor allele frequency- T:0.20NS EA WA CSA NA EU 1288
rs1176149981,2
C,F--30038720(+) GGAAAC/TGTGGA 2 -- ut312Minor allele frequency- T:0.01EA EU 653
rs1864375491,2
--30038731(+) GACCAC/GGTGAG 2 -- ut310--------
rs737281071,2
C,F--30038823(+) GGGGAA/GTTCCA 2 -- ut316Minor allele frequency- G:0.12WA NA EA EU 925
rs92612921,2
C,F--30038830(+) TCCACC/GCCCAA 2 -- ut316Minor allele frequency- G:0.18WA CSA NA EA EU 895
rs3728823861,2
C--30038875(+) TCTAGC/TTGGAG 2 -- ut310--------
rs1113011561,2
C,F--30038942(+) CAGAAC/TAGCGG 4 L syn12Minor allele frequency- T:0.00NA EU 3503
rs1469164571,2
C,F--30039005(+) AGTGAG/ACGGCC 3 /R int1 syn11Minor allele frequency- A:0.01NA 2466

HapMap Linkage Disequilibrium report for RNF39 (30038043 - 30043664 bp)

Structural Variations
     Database of Genomic Variants (DGV) 2 variations for RNF39:    About this table    
Variant IDTypeSubtypePubMed ID
esv2731777CNV Deletion23290073
nsv884049CNV Loss21882294

Site Specific Mutation Identification with PCR Assays
SeqTarget long-range PCR primers for resequencing RNF39
DNA2.0 Custom Variant and Variant Library Synthesis for RNF39

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

TryGeneCards Plus
OMIM gene information: 607524    OMIM disorders: --

5 diseases for RNF39:    
About MalaCards
behcet's disease    systemic lupus erythematosus    multiple sclerosis    lupus erythematosus
hiv-1


RNF39 for disorders           About GeneDecksing

Genetic Association Database (GAD): RNF39
Human Genome Epidemiology (HuGE) Navigator: RNF39 (6 documents)

Export disorders for RNF39 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

TryGeneCards Plus

PubMed articles for RNF39 gene, integrated from 10 sources (see all 18):
(articles sorted by number of sources associating them with RNF39)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Transcriptional analysis of the 69-kb sequence centromeric to HLA-J: a dense and complex structure of five genes. (PubMed id 11130983)1, 2, 3 Coriton O.... Mosser J. (Mamm. Genome 2000)
  2. A major histocompatibility Class I locus contributes to multiple sclerosis susceptibility independently from HLA-DRB1*15:01. (PubMed id 20593013)1, 4 Cree B.A.... . (PLoS ONE 2010)
  3. Common genetic variation and the control of HIV-1 in humans. (PubMed id 20041166)1, 4 Fellay J....Goldstein D.B. (PLoS Genet. 2009)
  4. Association of HLA-C and HCP5 gene regions with the clinical course of HIV-1 infection. (PubMed id 19050382)1, 4 van Manen D....Schuitemaker H. (AIDS 2009)
  5. High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PubMed id 19851445)1, 4 Barcellos L.F....Criswell L.A. (PLoS Genet. 2009)
  6. The HLA-B/-C haplotype block contains major determinants for host control of HIV. (PubMed id 19693088)1, 4 Trachtenberg E....Wolinsky S. (Genes Immun. 2009)
  7. Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02). (PubMed id 19115949)1, 4 Limou S....Zagury J.F. (J. Infect. Dis. 2009)
  8. The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)1, 2 Mungall A.J.... Beck S. (Nature 2003)
  9. LIRF, a gene induced during hippocampal long-term potentiation as an immediate-early gene, encodes a novel RING finger protein. (PubMed id 11716498)1, 3 Matsuo R....Inokuchi K. (Biochem. Biophys. Res. Commun. 2001)
  10. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with BehAset's disease. (PubMed id 20622878)4 Remmers E.F....GA1l A. (Nat. Genet. 2010)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

TryGeneCards Plus
 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

TryGeneCards Plus
Entrez Gene: 80352 HGNC: 18064 AceView: RNF39 Ensembl:ENSG00000204618 euGenes: HUgn80352
ECgene: RNF39 H-InvDB: RNF39

(According to HUGE)
About This Section

TryGeneCards Plus
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
About This Section

TryGeneCards Plus
NameDescription
PharmGKB entry for RNF39 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section

TryGeneCards Plus
Patent Information for RNF39 gene:
Search GeneIP for patents involving RNF39

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
About This Section

TryGeneCards Plus

 
 EMD Millipore genomic analysis products

  
 Browse Antibodies   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Enzyme Activity Assays/Reagents  
 Browse ELISpot/FluoroSpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Luminex Assays  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Recombinant/Natural Proteins   Browse Stem Cell Products  
 Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
 OriGene Antibodies for RNF39   OriGene RNAi products in human, mouse, rat for RNF39  
 Browse OriGene qPCR primer pairs and template standards   OriGene Protein Over-expression Lysate for RNF39  
 OriGene MassSpec something-or-other for RNF39   OriGene clones in human, mouse for RNF39  
 OriGene qSTAR qPCR primer pairs in human, mouse for RNF39   OriGene Purified Protein for RNF39  
 OriGene ORF clones in mouse, rat for RNF39   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for RNF39   OriGene Custom Protein Services for RNF39  

 
 
 Block miRNA regulation of human, mouse, rat RNF39 using miScript Target Protectors SeqTarget long-range PCR primers for resequencing RNF39
 DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat RNF39 Predesigned siRNA for gene silencing in human, mouse, rat RNF39
 QuantiFast Probe-based Assays in human, mouse, rat RNF39 QuantiTect SYBR Green Assays in human, mouse, rat RNF39
 Custom PCR Arrays for RNF39 Search Chromatin IP Primers for RNF39
 Pre-validated RT2 qPCR Primer Assay in human, mouse / rat RNF39  Search GeneGlobe Interaction Network for RNF39
 Regulatory tfbs in RNF39 promoter
 GenScript Custom Purified and Recombinant Proteins Services for RNF39 GenScript cDNA clones with any tag delivered in your preferred vector for RNF39
 GenScript Custom Assay Services for RNF39 GenScript Custom overexpressing Cell Line Services for RNF39
 CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
 Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
 Plasmid Preparation Custom Peptide Services
 Search for Antibodies & Assays

 Search Tocris compounds for RNF39
 Browse Sino Biological Proteins
 Browse Sino Biological Cell Lysates
 Browse Sino Biological cDNA Clones
 4000+ Proteins
 Search Sino Biological for antibodies, proteins & pathways
 Protein Production Services
 Transfection Reagents
 Protein A/G/L resins
 Isotyping reagents
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies

 Novus Tissue Slides
 RNF39 antibodies
 RNF39 proteins
 RNF39 lysates
 Antibodies for RNF39
 See all of Abcam's Antibodies, Kits and Proteins for RNF39
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins
 Proteins for RNF39
 Antibodies for RNF39
 ELISAs for RNF39
 CLIAs for RNF39



 Browse ESI BIO Cell Lines and PureStem Progenitors for RNF39
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RNF39
 SwitchGear 3'UTR luciferase reporter plasmids for RNF39
 SwitchGear Promoter luciferase reporter plasmids for RNF39
 ThermoFisher Antibodies for RNF39
 Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RNF39
 inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for RNF39
 inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for RNF39
 LSBio Antibodies in human, mouse, rat for RNF39
Customized transgenic rodents for:
 Humanization
 Biomarker expression
 Off-target effect monitoring
 Translational medicine
 Tissue-specific gene expresssion
 Time-controlled gene expresssion
 Browse compounds at ApexBio
       
GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014

View Random Gene

Category
(GIFtS: )
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      RNF39 gene at Home site.
Version: 3.12.166 28 Aug 2014
hostname: 356977-web1.xennexinc.com index build: 126 solr: 1.4