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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

RNF32 Gene

protein-coding GIFtS: 47
GCID: GC07P156433

ring finger protein 32

Explore 1 disease affiliated with
RNF32 via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
Ring Finger Protein 32¹ ²
FKSG33¹ ²
HSD15¹ ²

External Ids:	HGNC: 17118¹	Entrez Gene: 140545²	Ensembl: ENSG00000105982⁷	OMIM: 610241⁵	UniProtKB: Q9H0A6³

Export aliases for RNF32 gene to outside databases

Previous GC identifers: GC07P154663 GC07P155735 GC07P155850 GC07P155932 GC07P156126 GC07P156117 GC07P150166

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RNF32:

The protein encoded by this gene contains two RING ring finger motifs. RING finger motifs are present in a variety of

functionally distinct proteins and are known to be involved in protein-DNA or protein-protein interactions. This gene

was found to be expressed during spermatogenesis, most likely in spermatocytes and/or in spermatids. Several

alternatively spliced transcript variants encoding the same protein have been found for this gene. (provided by

RefSeq, Jan 2011)

UniProtKB/Swiss-Prot: RNF32_HUMAN, Q9H0A6

Function: May play a role in sperm formation

Gene Wiki entry for RNF32

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000007.13 NC_018918.1 NT_007741.14 NT_079596.2

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the RNF32 gene promoter:
LHX3b/Lhx3b Sox5 HTF Nkx2-5 POU6F1 (c2) GATA-1 C/EBPalpha CHOP-10 Sox9 LHX3a/Lhx3a
Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): RNF32 promoter sequence

Search SABiosciences Chromatin IP Primers for RNF32

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RNF32

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7q36 Ensembl cytogenetic band: 7q36.3 HGNC cytogenetic band: 7q36

RNF32 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RNF32 gene location

GeneLoc information about chromosome 7 GeneLoc Exon Structure

GeneLoc location for GC07P156433: view genomic region (about GC identifiers)

Start:	156,432,975 bp from pter	End:	156,469,824 bp from pter
Size:	36,850 bases	Orientation:	plus strand

1 alternative location:

Chr7+,CRA_TCAG 155,662,785-155,699,209

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RNF32_HUMAN, Q9H0A6 (See protein sequence)

Recommended Name: RING finger protein 32

Size: 362 amino acids; 41516 Da

Subcellular location: Cytoplasm

Secondary accessions: Q6FIB3 Q6X7T4 Q8N6V8 Q8TDG0 Q96BM5 Q9Y6U1

Alternative splicing: 5 isoforms: Q9H0A6-1 Q9H0A6-2 Q9H0A6-4 Q9H0A6-5 Q9H0A6-6 (No experimental confirmation available. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay)

Explore the universe of human proteins at neXtProt for RNF32: NX_Q9H0A6

RNF32 Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins (3 alternative transcripts):

NP_001171925.1 NP_001171926.1 NP_112198.1

ENSEMBL proteins:

ENSP00000385815 ENSP00000388088 ENSP00000315950 ENSP00000385285 ENSP00000308894

ENSP00000376497 ENSP00000376503 ENSP00000405588 ENSP00000376499 ENSP00000341185

ENSP00000376496

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	Uscn Proteins for RNF32

Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005768	endosome	IDA	--
GO:0016235	aggresome	IDA	11890671

RNF32 for ontologies About GeneDecksing

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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

RNF32 for domains About GeneDecksing

3 InterPro domains/families:

IPR001841 Znf_RING

IPR000048 IQ_motif_EF-hand-BS

IPR013083 Znf_RING/FYVE/PHD

Graphical View of Domain Structure for InterPro Entry Q9H0A6

ProtoNet protein and cluster: Q9H0A6

1 Blocks protein family: IPB001841 Zn-finger

UniProtKB/Swiss-Prot: RNF32_HUMAN, Q9H0A6

Similarity: Contains 1 IQ domain

Similarity: Contains 2 RING-type zinc fingers

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

UniProtKB/Swiss-Prot: RNF32_HUMAN, Q9H0A6

Function: May play a role in sperm formation

miRNA Products:		Browse 3'-UTR reporter clones for miRNA target validation Browse MicroRNA Expression Plasmids
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In Situ Assay
Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RNF32

Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005515	protein binding	IPI	--
GO:0008270	zinc ion binding	IEA	--

RNF32 for ontologies About GeneDecksing

2 GenomeRNAi human phenotypes for RNF32:

Cells with protrusions

Decreased G3BP1 protein expres

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for RNF32

STRING Interaction Network Preview (showing 5 interactants - click image to see 7)

5/31 Interacting proteins for RNF32 (Q9H0A6^{1, 2, 3} ENSP00000315950⁴) via UniProtKB, MINT, STRING, and/or I2D (see all 31)

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
FBXL12	Q9NXK8¹^,³	EBI-724829,EBI-719790 I2D: score=1
PRAM1	Q96QH2¹^,³	EBI-724829,EBI-2860740 I2D: score=1
STAMBPL1	Q96FJ0¹^,³	EBI-724829,EBI-745021 I2D: score=1
FIBP	O43427²^,³, ENSP00000344572⁴	MINT-63148 I2D: score=4 STRING: ENSP00000344572
UBE2K	P61086³, ENSP00000261427⁴	I2D: score=1 STRING: ENSP00000261427

About this table

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for RNF32
Search CenterWatch for drugs/clinical trials and news about RNF32

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for RNF32 gene (3 alternative transcripts):

NM_001184996.1 NM_001184997.1 NM_030936.3

Unigene Cluster for RNF32:

Ring finger protein 32

Hs.446194 [show with all ESTs]

Unigene Representative Sequence: BC015416

16 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000404282 ENST00000439609 ENST00000469382 ENST00000317955 ENST00000405335

ENST00000311822(uc003wmq.3) ENST00000392741(uc003wms.3 uc003wmt.3)

ENST00000392747(uc003wmu.3) ENST00000480011 ENST00000472537 ENST00000493999

ENST00000463028 ENST00000432459(uc003wmo.3 uc010lql.1 uc010lqm.3)

ENST00000392743(uc003wmr.3) ENST00000343665 ENST00000392740

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		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RNF32
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Additional cDNA sequence:

AF325690.1 AF441222.1 AK307316.1 AK314067.1 AL136874.1 BC015416.1 BC028120.1 BT007037.1

CR533513.1

12 DOTS entries:

DT.311225 DT.91670383 DT.108080 DT.452467 DT.95322906 DT.95370304 DT.101974717 DT.95101181

DT.100021414 DT.121106962 DT.86846940 DT.106815

24/65 AceView cDNA sequences (see all 65):

BX117234 AF325690 BX109196 BF508748 CA396731 BC015416 W86472 AI190316

AI472192 BE503002 CR599570 AL136874 NM_030936 BC028120 BT007037 N34954

AW665547 CR533513 AA904554 AA758018 AA626330 AI425010 BI461139 BI561658

GeneLoc Exon Structure

5/7 Alternative Splicing Database (ASD) splice patterns (SP) for RNF32 (see all 7) About this scheme

ExUns:	1a	·	1b	·	1c	^	2a	·	2b	·	2c	^	3	^	4	^	5	^	6a	·	6b	^	7	^	8	^	9
SP1:													-
SP2:
SP3:							-		-		-		-		-
SP4:													-		-
SP5:											-		-		-

ECgene alternative splicing isoforms for RNF32

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

RNF32 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GAAAAAGGAA

About this image
See RNF32 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for RNF32

SOURCE GeneReport for Unigene cluster: Hs.446194

UniProtKB/Swiss-Prot: RNF32_HUMAN, Q9H0A6

Tissue specificity: Highly expressed in testis, less abundant in ovary

SABiosciences Custom PCR Arrays for RNF32

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In Situ
Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RNF32

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for RNF32 gene from 5/16 species (see all 16) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
mouse (Mus musculus)	Mammalia	Rnf32^{1 , 5}	ring finger protein 32^{1, 5}	79.83(n)¹ 78.18(a)¹		5 (14.78 cM)⁵ 56874¹ NM_021470.5¹ NP_067445.3¹ 29195992⁵
chicken (Gallus gallus)	Aves	RNF32¹	ring finger protein 32	65.33(n) 60.57(a)		770441 XM_001233775.1 XP_001233776.1
lizard (Anolis carolinensis)	Reptilia	RNF32⁶	--	66(a)	1 ↔ 1	6(6280909-6292398)
tropical clawed frog (Xenopus tropicalis)	Amphibia	Str.13169²	Transcribed sequence with moderate similarity to protein more	72.25(n)		BX726641.1
zebrafish (Danio rerio)	Actinopterygii	Dr.18813²	Transcribed sequence with weak similarity to protein more	69.07(n)		CB366582.1

ENSEMBL Gene Tree for RNF32 (if available)
TreeFam Gene Tree for RNF32 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 7 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs6947383^1,2	C,F,	--	156435397(+)	`atcccA/Gtggca`	3	--	int¹ us2k¹		1		WA	118
rs113732037^1,2	C,	--	156435450(+)	`CTCACA/GTGCAC`	3	--	int¹ us2k¹		0	--	--	--	--
rs117218920^1,2	C,F,	--	156435599(+)	`TAGAAG/AAAATA`	3	--	us2k¹ int¹		1		EA	120
rs142164681^1,2		--	156435605(+)	`AAATAC/TGTTCA`	3	--	int¹ us2k¹		0	--	--	--	--
rs115696190^1,2		--	156435627(+)	`TGCCAG/ATTCCT`	3	--	int¹ us2k¹		1		WA	118
rs183559143^1,2		--	156435708(+)	`CACCAC/TGTCCA`	3	--	ut5¹ int¹		0	--	--	--	--
rs151183349^1,2		--	156435715(+)	`TCCAAA/GATCTA`	3	--	int¹ ut5¹		0	--	--	--	--
rs74587902^1,2	C,F,	--	156435780(+)	`AACAAG/AAGTAA`	3	--	int¹ ut5¹		1		WA	118
rs188044844^1,2		--	156435797(+)	`TGTGAA/GAAGAC`	3	--	int¹		0	--	--	--	--
rs140207092^1,2		--	156435932(+)	`AAAGCA/GGTAGA`	3	--	int¹		0	--	--	--	--

HapMap Linkage Disequilibrium report for RNF32 (156432975 - 156469824 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for RNF32: --

SABiosciences Cancer Mutation PCR Assays

Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RNF32

DNA2.0 Custom Variant and Variant Library Synthesis for RNF32

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

RNF32 for disorders           About GeneDecksing

OMIM gene information: 610241    OMIM disorders: --

1 disease for RNF32:    About MalaCards

polydactyly

1 disease from the University of Copenhagen DISEASES database for RNF32:

Polydactyly

Export disorders for RNF32 gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for RNF32 gene, integrated from 9 sources (see all 15):
(articles sorted by number of sources associating them with RNF32)

Utopia: connect your pdf to the dynamic
world of online information

A double RING-H2 domain in RNF32, a gene expressed during sperm formation. (PubMed id 11890671)^{1, 2, 3} van Baren M.J.... Heutink P. (2002)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{1, 2} Gerhard D.S....Malek J. (2004)
The DNA sequence of human chromosome 7. (PubMed id 12853948)^{1, 2} Hillier L.W.... Wilson R.K. (2003)
Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PubMed id 11230166)^{1, 2} Wiemann S.... Poustka A. (2001)
Systematic analysis of dimeric E3-RING interactions re veals increased combinatorial complexity in human ubiquitination networks. (PubMed id 22493164)¹ Woodsmith J....Sanderson C.M. (2012)
Interactions of pathological hallmark proteins: tubul in polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049)¹ OlA!h J....OvA!di J. (2011)
Interactome mapping suggests new mechanistic details u nderlying Alzheimer's disease. (PubMed id 21163940)¹ Soler-Lopez M....Aloy P. (2011)
Analysis of the human E2 ubiquitin conjugating enzyme protein interaction network. (PubMed id 19549727)¹ Markson G....Sanderson C.M. (2009)
The LIFEdb database in 2006. (PubMed id 16381901)¹ Mehrle A....Wiemann S. (2006)
A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070)¹ Stelzl U.... Wanker E.E. (2005)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 140545	HGNC: 17118	AceView: RNF32	Ensembl:ENSG00000105982	euGenes: HUgn140545
ECgene: RNF32	H-InvDB: RNF32

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for RNF32	Pharmacogenomics, SNPs, Pathways

Intellectual Property for RNF32 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for RNF32 gene:
Search GeneIP for patents involving RNF32

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

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GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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Category			VWF (GIFTS: 73) von Willebrand factor
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The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

The GeneCards Human Gene Database

Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes Disease genes RNF32 gene at Home site.

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RNF32 Gene

ring finger protein 32

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RNF32 Gene

ring finger protein 32

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