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Aliases for RNF219-AS1 Gene

Subcategory (RNA class) for RNF219-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RNF219-AS1 Gene

  • RNF219 Antisense RNA 1 2 3 5
  • POU4F1 Antisense RNA 1 (Non-Protein Coding) 3
  • POU4F1 Antisense RNA 1 2
  • POU4F1-AS1 3

External Ids for RNF219-AS1 Gene

Previous HGNC Symbols for RNF219-AS1 Gene

  • POU4F1-AS1

Previous GeneCards Identifiers for RNF219-AS1 Gene

  • GC13P079154
  • GC13P078495
  • GC13P078497

Summaries for RNF219-AS1 Gene

GeneCards Summary for RNF219-AS1 Gene

RNF219-AS1 (RNF219 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF219-AS1 Gene

Genomics for RNF219-AS1 Gene

Regulatory Elements for RNF219-AS1 Gene

Promoters for RNF219-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RNF219-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNF219-AS1 Gene

Chromosome:
13
Start:
77,919,689 bp from pter
End:
78,617,328 bp from pter
Size:
697,640 bases
Orientation:
Plus strand

Genomic View for RNF219-AS1 Gene

Genes around RNF219-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNF219-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNF219-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF219-AS1 Gene

Proteins for RNF219-AS1 Gene

Post-translational modifications for RNF219-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF219-AS1 Gene

Domains & Families for RNF219-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNF219-AS1 Gene

Function for RNF219-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNF219-AS1 Gene

Localization for RNF219-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNF219-AS1 Gene

Pathways & Interactions for RNF219-AS1 Gene

SuperPathways for RNF219-AS1 Gene

No Data Available

Interacting Proteins for RNF219-AS1 Gene

Gene Ontology (GO) - Biological Process for RNF219-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNF219-AS1 Gene

Drugs & Compounds for RNF219-AS1 Gene

No Compound Related Data Available

Transcripts for RNF219-AS1 Gene

mRNA/cDNA for RNF219-AS1 Gene

(3) Additional mRNA sequences :
(14) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RNF219-AS1 Gene

RNF219 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RNF219-AS1 Gene

No ASD Table

Relevant External Links for RNF219-AS1 Gene

GeneLoc Exon Structure for
RNF219-AS1
ECgene alternative splicing isoforms for
RNF219-AS1

Expression for RNF219-AS1 Gene

mRNA expression in normal human tissues for RNF219-AS1 Gene

SOURCE GeneReport for Unigene cluster for RNF219-AS1 Gene Hs.493062

genes like me logo Genes that share expression patterns with RNF219-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNF219-AS1 Gene

Orthologs for RNF219-AS1 Gene

Evolution for RNF219-AS1 Gene

ENSEMBL:
Gene Tree for RNF219-AS1 (if available)
TreeFam:
Gene Tree for RNF219-AS1 (if available)

No data available for Orthologs for RNF219-AS1 Gene

Paralogs for RNF219-AS1 Gene

No data available for Paralogs for RNF219-AS1 Gene

Variants for RNF219-AS1 Gene

Sequence variations from dbSNP and Humsavar for RNF219-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs20408 -- 78,287,107(-) AGGCA(A/G)TTTTA intron-variant
rs942868 -- 78,558,413(+) TAATA(C/T)ATAAC intron-variant
rs944383 -- 78,100,255(-) AGGAC(A/G)TCTGC intron-variant
rs944385 -- 78,054,694(+) CACCT(A/C/T)GCCTA upstream-variant-2KB
rs1012214 -- 78,382,064(+) cgcgc(A/G)cacac intron-variant

Relevant External Links for RNF219-AS1 Gene

HapMap Linkage Disequilibrium report
RNF219-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNF219-AS1 Gene

Disorders for RNF219-AS1 Gene

Relevant External Links for RNF219-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RNF219-AS1

No disorders were found for RNF219-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNF219-AS1 Gene

Publications for RNF219-AS1 Gene

  1. Genetic variants associated with serum thyroid stimulating hormone (TSH) levels in European Americans and African Americans from the eMERGE Network. (PMID: 25436638) Malinowski J.R. … Crawford D.C. (PLoS ONE 2014) 3 67
  2. Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. (PMID: 24376456) Simino J. … Rao D.C. (Front Genet 2013) 3
  3. Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease. (PMID: 21116278) Furney S.J. … . (Mol. Psychiatry 2011) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for RNF219-AS1 Gene

Sources for RNF219-AS1 Gene

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