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Aliases for RNF217-AS1 Gene

Subcategory (RNA class) for RNF217-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RNF217-AS1 Gene

  • RNF217 Antisense RNA 1 (Head To Head) 2 3
  • Six-Twelve Leukemia 2 3
  • STL 3 6

External Ids for RNF217-AS1 Gene

Summaries for RNF217-AS1 Gene

GeneCards Summary for RNF217-AS1 Gene

RNF217-AS1 (RNF217 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF217-AS1 Gene

Genomics for RNF217-AS1 Gene

Genomic Location for RNF217-AS1 Gene

Start:
124,908,243 bp from pter
End:
124,963,039 bp from pter
Size:
54,797 bases
Orientation:
Minus strand

Genomic View for RNF217-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNF217-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF217-AS1 Gene

No data available for Regulatory Elements for RNF217-AS1 Gene

Proteins for RNF217-AS1 Gene

Post-translational modifications for RNF217-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF217-AS1 Gene

Domains for RNF217-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNF217-AS1 Gene

Function for RNF217-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNF217-AS1 Gene

Localization for RNF217-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNF217-AS1 Gene

Pathways for RNF217-AS1 Gene

SuperPathways for RNF217-AS1 Gene

No Data Available

Interacting Proteins for RNF217-AS1 Gene

Gene Ontology (GO) - Biological Process for RNF217-AS1 Gene

None

No data available for Pathways by source for RNF217-AS1 Gene

Transcripts for RNF217-AS1 Gene

mRNA/cDNA for RNF217-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RNF217-AS1
    • Block miRNA regulation of RNF217-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for RNF217-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for RNF217-AS1 Gene

    No ASD Table

    Relevant External Links for RNF217-AS1 Gene

    GeneLoc Exon Structure for
    RNF217-AS1
    ECgene alternative splicing isoforms for
    RNF217-AS1

    Expression for RNF217-AS1 Gene

    mRNA expression in normal human tissues for RNF217-AS1 Gene

    genes like me logo Genes that share expressions with RNF217-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for RNF217-AS1 Gene

    Orthologs for RNF217-AS1 Gene

    Evolution for RNF217-AS1 Gene

    ENSEMBL:
    Gene Tree for RNF217-AS1 (if available)
    TreeFam:
    Gene Tree for RNF217-AS1 (if available)

    No data available for Orthologs for RNF217-AS1 Gene

    Paralogs for RNF217-AS1 Gene

    No data available for Paralogs for RNF217-AS1 Gene

    Variants for RNF217-AS1 Gene

    Sequence variations from dbSNP and Humsavar for RNF217-AS1 Gene

    SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
    rs699387 -- 124,910,926(+) TTTTA(C/T)AGTTT nc-transcript-variant
    rs781732 -- 124,907,947(-) TTGGA(A/G)ACCAA downstream-variant-500B
    rs781733 -- 124,908,392(-) gatac(A/G)tgatt nc-transcript-variant
    rs781734 -- 124,908,710(-) tcata(A/G)caggc nc-transcript-variant
    rs781735 -- 124,908,929(-) aacaa(G/T)ggttg nc-transcript-variant

    Relevant External Links for RNF217-AS1 Gene

    HapMap Linkage Disequilibrium report
    RNF217-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RNF217-AS1 Gene

    Disorders for RNF217-AS1 Gene

    No disorders were found for RNF217-AS1 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for RNF217-AS1 Gene

    Publications for RNF217-AS1 Gene

    1. A t(6;12)(q23;p13) results in the fusion of ETV6 to a novel gene, STL, in a B-cell ALL cell line. (PMID: 9087565) Suto Y. … Bohlander S.K. (Genes Chromosomes Cancer 1997) 2 3 23
    2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

    Products for RNF217-AS1 Gene

    Sources for RNF217-AS1 Gene

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