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Aliases for RNF216P1 Gene

Aliases for RNF216P1 Gene

  • Ring Finger Protein 216 Pseudogene 1 2 3 5
  • RNF216L 3 4
  • Ring Finger Protein 216-Like 2
  • HCG2040556 3

External Ids for RNF216P1 Gene

Previous HGNC Symbols for RNF216P1 Gene

  • RNF216L

Previous GeneCards Identifiers for RNF216P1 Gene

  • GC07P005015

Summaries for RNF216P1 Gene

GeneCards Summary for RNF216P1 Gene

RNF216P1 (Ring Finger Protein 216 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF216P1 Gene

Genomics for RNF216P1 Gene

Regulatory Elements for RNF216P1 Gene

Enhancers for RNF216P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F005416 1.3 FANTOM5 ENCODE 33.2 +450.0 449996 15.1 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC RNF216P1 RPL22P16 USP42 TNRC18 FBXL18 ENSG00000188365
GH07F005496 0.9 Ensembl ENCODE 19.3 +523.5 523525 1.1 HDAC1 SCRT2 ZNF202 ZNF680 ZNF654 ZBTB2 ZBTB11 REST ZNF623 ZNF781 USP42 ANKRD61 RNF216P1 MIR589 FBXL18
GH07F004619 1 Ensembl ENCODE 13.7 -353.2 -353228 2.7 PKNOX1 ZFP64 REST ZNF518A ZNF623 SMARCA4 PBX2 MYNN STAT3 HMBOX1 RNF216P1 AP5Z1 GC07P004617 FOXK1
GH07F005702 1.2 Ensembl ENCODE 13.7 +730.0 729956 2.6 ELF3 ARID4B RAD21 RFX5 ZNF143 FOS CREM MIXL1 ZNF654 REST C7orf26 ZNF316 RNF216P1 USP42 FBXL18 MIR589 ACTB FSCN1 MIR6874 RNF216-IT1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNF216P1 on UCSC Golden Path with GeneCards custom track

Promoters for RNF216P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for RNF216P1 Gene

4,973,985 bp from pter
5,040,675 bp from pter
66,691 bases
Plus strand

Genomic View for RNF216P1 Gene

Genes around RNF216P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNF216P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNF216P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF216P1 Gene

Proteins for RNF216P1 Gene

  • Protein details for RNF216P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative protein RNF216-like
    Protein Accession:
    Secondary Accessions:
    • B7Z8S6

    Protein attributes for RNF216P1 Gene

    42 amino acids
    Molecular mass:
    5133 Da
    Quaternary structure:
    No Data Available
    • Sequence=BAH14062.1; Type=Erroneous translation; Note=Wrong choice of frame.; Evidence={ECO:0000305};

neXtProt entry for RNF216P1 Gene

Post-translational modifications for RNF216P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF216P1 Gene

Domains & Families for RNF216P1 Gene

Protein Domains for RNF216P1 Gene


Suggested Antigen Peptide Sequences for RNF216P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNF216P1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for RNF216P1 Gene

Function for RNF216P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNF216P1 Gene

Localization for RNF216P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNF216P1 Gene

Pathways & Interactions for RNF216P1 Gene

SuperPathways for RNF216P1 Gene

No Data Available

Interacting Proteins for RNF216P1 Gene

Gene Ontology (GO) - Biological Process for RNF216P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNF216P1 Gene

Transcripts for RNF216P1 Gene

mRNA/cDNA for RNF216P1 Gene

(10) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(13) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RNF216P1 Gene

Ring finger protein 216 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RNF216P1 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8a · 8b
SP1: - - -
SP3: -
SP4: - - - - - - - -
SP5: -

Relevant External Links for RNF216P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNF216P1 Gene

mRNA expression in normal human tissues for RNF216P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNF216P1 Gene:


SOURCE GeneReport for Unigene cluster for RNF216P1 Gene:

genes like me logo Genes that share expression patterns with RNF216P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNF216P1 Gene

Orthologs for RNF216P1 Gene

Evolution for RNF216P1 Gene

Gene Tree for RNF216P1 (if available)
Gene Tree for RNF216P1 (if available)

No data available for Orthologs for RNF216P1 Gene

Paralogs for RNF216P1 Gene

(1) SIMAP similar genes for RNF216P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RNF216P1: view

No data available for Paralogs for RNF216P1 Gene

Variants for RNF216P1 Gene

Sequence variations from dbSNP and Humsavar for RNF216P1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10156118 -- 4,983,571(+) TGTAA(C/T)GTGTG intron-variant
rs10227163 -- 4,988,549(+) ACCAC(C/T)GTACC intron-variant
rs10229113 -- 4,986,680(+) GGCAG(A/G)CAGAC intron-variant
rs10231660 -- 4,983,940(+) TTCAG(C/T)GCGAT intron-variant
rs10232604 -- 4,987,152(+) gggta(G/T)atgcc intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RNF216P1 Gene

Variant ID Type Subtype PubMed ID
dgv3482n106 OTHER inversion 24896259
dgv6238n100 CNV loss 25217958
esv3611961 CNV loss 21293372
esv3611962 CNV loss 21293372
nsv1019120 CNV loss 25217958
nsv525289 CNV loss 19592680
nsv8033 CNV loss 18304495
nsv966749 CNV duplication 23825009
nsv981425 CNV duplication 23825009

Relevant External Links for RNF216P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RNF216P1 Gene

Disorders for RNF216P1 Gene

Relevant External Links for RNF216P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RNF216P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNF216P1 Gene

Publications for RNF216P1 Gene

  1. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  4. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 4 64
  5. A novel zinc finger protein interacts with receptor-interacting protein (RIP) and inhibits tumor necrosis factor (TNF)- and IL1- induced NF-kappa B activation. (PMID: 11854271) Chen D. … Shu H.-B. (J. Biol. Chem. 2002) 3 64

Products for RNF216P1 Gene

Sources for RNF216P1 Gene

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