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Aliases for RNF138P1 Gene

Aliases for RNF138P1 Gene

  • Ring Finger Protein 138, E3 Ubiquitin Protein Ligase Pseudogene 1 2 3
  • Ring Finger Protein 138 Pseudogene 1 2

External Ids for RNF138P1 Gene

Previous GeneCards Identifiers for RNF138P1 Gene

  • GC05M054840
  • GC05M054860
  • GC05M054824

Summaries for RNF138P1 Gene

GeneCards Summary for RNF138P1 Gene

RNF138P1 (Ring Finger Protein 138, E3 Ubiquitin Protein Ligase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF138P1 Gene

Genomics for RNF138P1 Gene

Regulatory Elements for RNF138P1 Gene

Genomic Location for RNF138P1 Gene

Start:
55,528,842 bp from pter
End:
55,534,542 bp from pter
Size:
5,701 bases
Orientation:
Minus strand

Genomic View for RNF138P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNF138P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF138P1 Gene

Proteins for RNF138P1 Gene

Post-translational modifications for RNF138P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF138P1 Gene

Domains for RNF138P1 Gene

Gene Families for RNF138P1 Gene

HGNC:
  • RNF :RING-type (C3HC4) zinc fingers

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNF138P1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNF138P1 Gene

Function for RNF138P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNF138P1 Gene

Localization for RNF138P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNF138P1 Gene

Pathways for RNF138P1 Gene

SuperPathways for RNF138P1 Gene

No Data Available

Interacting Proteins for RNF138P1 Gene

Gene Ontology (GO) - Biological Process for RNF138P1 Gene

None

No data available for Pathways by source for RNF138P1 Gene

Transcripts for RNF138P1 Gene

mRNA/cDNA for RNF138P1 Gene

(7) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RNF138P1 Gene

Ring finger protein 138, E3 ubiquitin protein ligase pseudogene 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RNF138P1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for RNF138P1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNF138P1 Gene

No ASD Table

Relevant External Links for RNF138P1 Gene

GeneLoc Exon Structure for
RNF138P1
ECgene alternative splicing isoforms for
RNF138P1

Expression for RNF138P1 Gene

mRNA expression in normal human tissues for RNF138P1 Gene

mRNA differential expression in normal tissues according to GTEx for RNF138P1 Gene

This gene is overexpressed in Prostate (6.8).

SOURCE GeneReport for Unigene cluster for RNF138P1 Gene Hs.745164

genes like me logo Genes that share expressions with RNF138P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for RNF138P1 Gene

Orthologs for RNF138P1 Gene

Evolution for RNF138P1 Gene

ENSEMBL:
Gene Tree for RNF138P1 (if available)
TreeFam:
Gene Tree for RNF138P1 (if available)

No data available for Orthologs for RNF138P1 Gene

Paralogs for RNF138P1 Gene

No data available for Paralogs for RNF138P1 Gene

Variants for RNF138P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for RNF138P1 Gene

Variant ID Type Subtype PubMed ID
dgv6070n71 CNV Loss 21882294
nsv881072 CNV Loss 21882294
nsv830304 CNV Gain+Loss 17160897
esv2675371 CNV Deletion 23128226
nsv4834 CNV Insertion 18451855

Relevant External Links for RNF138P1 Gene

HapMap Linkage Disequilibrium report
RNF138P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for RNF138P1 Gene

Disorders for RNF138P1 Gene

No disorders were found for RNF138P1 Gene.

No data available for UniProtKB/Swiss-Prot for RNF138P1 Gene

Publications for RNF138P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for RNF138P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RNF138P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RNF138P1
    • Block miRNA regulation of RNF138P1 using miScript Target Protectors

    Sources for RNF138P1 Gene

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