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Aliases for RNF133 Gene

Aliases for RNF133 Gene

  • Ring Finger Protein 133 2 3
  • RING Finger Protein 133 4
  • EC 6.3.2.- 4

External Ids for RNF133 Gene

Previous GeneCards Identifiers for RNF133 Gene

  • GC07M121878
  • GC07M121892
  • GC07M121931
  • GC07M122125
  • GC07M122337
  • GC07M116700

Summaries for RNF133 Gene

Entrez Gene Summary for RNF133 Gene

  • The protein encoded by this gene contains a RING finger domain, a motif present in a variety of functionally distinct proteins and known to be involved in protein-protein and protein-DNA interactions. This gene has no intron. [provided by RefSeq, Jul 2008]

GeneCards Summary for RNF133 Gene

RNF133 (Ring Finger Protein 133) is a Protein Coding gene. GO annotations related to this gene include ligase activity. An important paralog of this gene is RNF167.

UniProtKB/Swiss-Prot for RNF133 Gene

  • Has E3 ubiquitin-protein ligase activity.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNF133 Gene

Genomics for RNF133 Gene

Regulatory Elements for RNF133 Gene

Genomic Location for RNF133 Gene

Start:
122,697,712 bp from pter
End:
122,699,156 bp from pter
Size:
1,445 bases
Orientation:
Minus strand

Genomic View for RNF133 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNF133 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF133 Gene

Proteins for RNF133 Gene

  • Protein details for RNF133 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8WVZ7-RN133_HUMAN
    Recommended name:
    E3 ubiquitin-protein ligase RNF133
    Protein Accession:
    Q8WVZ7
    Secondary Accessions:
    • A4D0W2
    • Q8N7G7

    Protein attributes for RNF133 Gene

    Size:
    376 amino acids
    Molecular mass:
    42294 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RNF133 Gene

Proteomics data for RNF133 Gene at MOPED

Post-translational modifications for RNF133 Gene

Other Protein References for RNF133 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RNF133 Gene

Domains for RNF133 Gene

Gene Families for RNF133 Gene

HGNC:
  • RNF :RING-type (C3HC4) zinc fingers

Protein Domains for RNF133 Gene

Suggested Antigen Peptide Sequences for RNF133 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8WVZ7

UniProtKB/Swiss-Prot:

RN133_HUMAN :
  • Q8WVZ7
Domain:
  • Contains 1 PA (protease associated) domain.
Similarity:
  • Contains 1 RING-type zinc finger.
genes like me logo Genes that share domains with RNF133: view

Function for RNF133 Gene

Molecular function for RNF133 Gene

UniProtKB/Swiss-Prot Function: Has E3 ubiquitin-protein ligase activity.

Enzyme Numbers (IUBMB) for RNF133 Gene

Gene Ontology (GO) - Molecular Function for RNF133 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
GO:0008270 zinc ion binding IEA --
GO:0016874 ligase activity IEA --
GO:0046872 metal ion binding --
genes like me logo Genes that share ontologies with RNF133: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RNF133

In Situ Assay Products

Flow Cytometry Products

No data available for Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNF133 Gene

Localization for RNF133 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RNF133 Gene

Endoplasmic reticulum membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RNF133 Gene COMPARTMENTS Subcellular localization image for RNF133 gene
Compartment Confidence
endoplasmic reticulum 5
extracellular 2
cytoskeleton 1
cytosol 1
golgi apparatus 1
lysosome 1
mitochondrion 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for RNF133 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005789 endoplasmic reticulum membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with RNF133: view

Pathways for RNF133 Gene

SuperPathways for RNF133 Gene

No Data Available

UniProtKB/Swiss-Prot Q8WVZ7-RN133_HUMAN

  • Pathway: Protein modification; protein ubiquitination

Gene Ontology (GO) - Biological Process for RNF133 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0051865 protein autoubiquitination IEA --
genes like me logo Genes that share ontologies with RNF133: view

No data available for Pathways by source for RNF133 Gene

Transcripts for RNF133 Gene

mRNA/cDNA for RNF133 Gene

(28) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RNF133 Gene

Ring finger protein 133:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RNF133

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNF133 Gene

No ASD Table

Relevant External Links for RNF133 Gene

GeneLoc Exon Structure for
RNF133
ECgene alternative splicing isoforms for
RNF133

Expression for RNF133 Gene

mRNA expression in normal human tissues for RNF133 Gene

mRNA differential expression in normal tissues according to GTEx for RNF133 Gene

This gene is overexpressed in Testis (44.8).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for RNF133 Gene

SOURCE GeneReport for Unigene cluster for RNF133 Gene Hs.126730

genes like me logo Genes that share expressions with RNF133: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for RNF133 Gene

Orthologs for RNF133 Gene

This gene was present in the common ancestor of animals.

Orthologs for RNF133 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RNF133 35
  • 99.65 (n)
  • 99.47 (a)
cow
(Bos Taurus)
Mammalia RNF133 35
  • 83.07 (n)
  • 77.39 (a)
dog
(Canis familiaris)
Mammalia RNF133 35
  • 68.59 (n)
  • 68.41 (a)
mouse
(Mus musculus)
Mammalia Rnf133 35
  • 81.02 (n)
  • 74.1 (a)
Rnf133 16
Rnf133 36
  • 73 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rnf133 35
  • 80.8 (n)
  • 72.8 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 39 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 35 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii rnf128a 36
  • 35 (a)
ManyToMany
si:dkeyp-86f7.4 36
  • 30 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea H10E21.5 36
  • 15 (a)
OneToMany
Species with no ortholog for RNF133:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for RNF133 Gene

ENSEMBL:
Gene Tree for RNF133 (if available)
TreeFam:
Gene Tree for RNF133 (if available)

Paralogs for RNF133 Gene

Selected SIMAP similar genes for RNF133 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RNF133: view

Variants for RNF133 Gene

Relevant External Links for RNF133 Gene

HapMap Linkage Disequilibrium report
RNF133

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RNF133 Gene

Disorders for RNF133 Gene

Relevant External Links for RNF133

Genetic Association Database (GAD)
RNF133
Human Genome Epidemiology (HuGE) Navigator
RNF133
genes like me logo Genes that share disorders with RNF133: view

No data available for UniProtKB/Swiss-Prot for RNF133 Gene

Publications for RNF133 Gene

  1. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  5. Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. (PMID: 24324551) Deng X. … Seielstad M. (PLoS ONE 2013) 3

Products for RNF133 Gene

Sources for RNF133 Gene

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