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Aliases for RNASE8 Gene

Aliases for RNASE8 Gene

  • Ribonuclease, RNase A Family, 8 2 3
  • EC 3.1.27.5 63
  • EC 3.1.27.- 4
  • EC 3.1.27 63
  • RNase 8 4

External Ids for RNASE8 Gene

Previous GeneCards Identifiers for RNASE8 Gene

  • GC14P018898
  • GC14P015313
  • GC14P019516
  • GC14P020595
  • GC14P021525
  • GC14P001647

Summaries for RNASE8 Gene

Entrez Gene Summary for RNASE8 Gene

  • The protein encoded by this gene belongs to the pancreatic ribonuclease family, a subset of the ribonuclease A superfamily. The protein is expressed prominently in the placenta and exhibits antimicrobial activity against pathogenic bacteria and fungi. [provided by RefSeq, Oct 2014]

GeneCards Summary for RNASE8 Gene

RNASE8 (Ribonuclease, RNase A Family, 8) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and ribonuclease A activity. An important paralog of this gene is ANG.

UniProtKB/Swiss-Prot for RNASE8 Gene

  • Has a low ribonuclease activity

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNASE8 Gene

Genomics for RNASE8 Gene

Regulatory Elements for RNASE8 Gene

Genomic Location for RNASE8 Gene

Start:
21,057,822 bp from pter
End:
21,058,455 bp from pter
Size:
634 bases
Orientation:
Plus strand

Genomic View for RNASE8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNASE8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNASE8 Gene

Proteins for RNASE8 Gene

  • Protein details for RNASE8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TDE3-RNAS8_HUMAN
    Recommended name:
    Ribonuclease 8
    Protein Accession:
    Q8TDE3
    Secondary Accessions:
    • B2RPP6
    • B2RPP7

    Protein attributes for RNASE8 Gene

    Size:
    154 amino acids
    Molecular mass:
    17041 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RNASE8 Gene

Proteomics data for RNASE8 Gene at MOPED

Selected DME Specific Peptides for RNASE8 Gene

Post-translational modifications for RNASE8 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for RNASE8 Gene

ENSEMBL proteins:
REFSEQ proteins:

Domains for RNASE8 Gene

Gene Families for RNASE8 Gene

HGNC:
  • RNASE :Ribonucleases, RNase A

Protein Domains for RNASE8 Gene

Suggested Antigen Peptide Sequences for RNASE8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8TDE3

UniProtKB/Swiss-Prot:

RNAS8_HUMAN :
  • Q8TDE3
Family:
  • Belongs to the pancreatic ribonuclease family.
genes like me logo Genes that share domains with RNASE8: view

Function for RNASE8 Gene

Molecular function for RNASE8 Gene

UniProtKB/Swiss-Prot Function: Has a low ribonuclease activity

Enzyme Numbers (IUBMB) for RNASE8 Gene

Gene Ontology (GO) - Molecular Function for RNASE8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0004522 ribonuclease A activity IDA 11861908
genes like me logo Genes that share ontologies with RNASE8: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RNASE8

In Situ Assay Products

Flow Cytometry Products

No data available for Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNASE8 Gene

Localization for RNASE8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RNASE8 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RNASE8 Gene COMPARTMENTS Subcellular localization image for RNASE8 gene
Compartment Confidence
extracellular 4
nucleus 1

Gene Ontology (GO) - Cellular Components for RNASE8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with RNASE8: view

Pathways for RNASE8 Gene

SuperPathways for RNASE8 Gene

No Data Available

Interacting Proteins for RNASE8 Gene

Gene Ontology (GO) - Biological Process for RNASE8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IDA 11861908
genes like me logo Genes that share ontologies with RNASE8: view

No data available for Pathways by source for RNASE8 Gene

Transcripts for RNASE8 Gene

mRNA/cDNA for RNASE8 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RNASE8

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for RNASE8
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNASE8 Gene

No ASD Table

Relevant External Links for RNASE8 Gene

GeneLoc Exon Structure for
RNASE8
ECgene alternative splicing isoforms for
RNASE8

Expression for RNASE8 Gene

mRNA expression in normal human tissues for RNASE8 Gene

SOURCE GeneReport for Unigene cluster for RNASE8 Gene Hs.553572

mRNA Expression by UniProt/SwissProt for RNASE8 Gene

Q8TDE3-RNAS8_HUMAN
Tissue specificity: Expressed prominently in the placenta and is not detected in any other tissues examined
genes like me logo Genes that share expressions with RNASE8: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Protein expression for RNASE8 Gene

Orthologs for RNASE8 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNASE8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RNASE8 35
  • 97.84 (n)
  • 96.1 (a)
RNASE8 36
  • 94 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 69 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 58 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 31 (a)
ManyToMany
chicken
(Gallus gallus)
Aves ANG 36
  • 27 (a)
ManyToMany
CL2 36
  • 26 (a)
ManyToMany
RSFR 36
  • 25 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 21 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
Species with no ortholog for RNASE8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNASE8 Gene

ENSEMBL:
Gene Tree for RNASE8 (if available)
TreeFam:
Gene Tree for RNASE8 (if available)

Paralogs for RNASE8 Gene

Paralogs for RNASE8 Gene

Selected SIMAP similar genes for RNASE8 Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with RNASE8: view

Variants for RNASE8 Gene

Sequence variations from dbSNP and Humsavar for RNASE8 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
VAR_052194 -

Structural Variations from Database of Genomic Variants (DGV) for RNASE8 Gene

Variant ID Type Subtype PubMed ID
nsv428293 CNV Gain+Loss 18775914
nsv832740 CNV Gain 17160897
nsv826882 CNV Gain 20364138

Relevant External Links for RNASE8 Gene

HapMap Linkage Disequilibrium report
RNASE8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RNASE8 Gene

Disorders for RNASE8 Gene

No disorders were found for RNASE8 Gene.

No data available for UniProtKB/Swiss-Prot for RNASE8 Gene

Publications for RNASE8 Gene

  1. RNase 8, a novel RNase A superfamily ribonuclease expressed uniquely in placenta. (PMID: 11861908) Zhang J. … Rosenberg H.F. (Nucleic Acids Res. 2002) 2 3 4 23
  2. Identification of RNase 8 as a novel human antimicrobial protein. (PMID: 16940129) Rudolph B. … Harder J. (Antimicrob. Agents Chemother. 2006) 3 23
  3. Disulfide-bond reshuffling in the evolution of an ape placental ribonuclease. (PMID: 17116644) Zhang J. (Mol. Biol. Evol. 2007) 3 23
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Genetic diversity of human RNase 8. (PMID: 22272736) Chan C.C. … Rosenberg H.F. (BMC Genomics 2012) 3

Products for RNASE8 Gene

Sources for RNASE8 Gene

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