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Aliases for RNASE13 Gene

Aliases for RNASE13 Gene

  • Ribonuclease, RNase A Family, 13 (Non-Active) 2 3
  • Epididymis Secretory Sperm Binding Protein Li 86p 3
  • Probable Inactive Ribonuclease-Like Protein 13 3
  • Ribonuclease-Like Protein 13 3
  • Ribonuclease A L1 3
  • Ribonuclease 13 3
  • HEL-S-86p 3
  • RAL1 3

External Ids for RNASE13 Gene

Summaries for RNASE13 Gene

GeneCards Summary for RNASE13 Gene

RNASE13 (Ribonuclease, RNase A Family, 13 (Non-Active)) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and ribonuclease A activity.

UniProtKB/Swiss-Prot for RNASE13 Gene

  • Does not exhibit any ribonuclease activity.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNASE13 Gene

Genomics for RNASE13 Gene

Genomic Location for RNASE13 Gene

Start:
21,032,820 bp from pter
End:
21,034,785 bp from pter
Size:
1,966 bases
Orientation:
Minus strand

Genomic View for RNASE13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNASE13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNASE13 Gene

Regulatory Elements for RNASE13 Gene

Proteins for RNASE13 Gene

  • Protein details for RNASE13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5GAN3-RNS13_HUMAN
    Recommended name:
    Probable inactive ribonuclease-like protein 13
    Protein Accession:
    Q5GAN3
    Secondary Accessions:

    Protein attributes for RNASE13 Gene

    Size:
    156 amino acids
    Molecular mass:
    17845 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RNASE13 Gene

Proteomics data for RNASE13 Gene at MOPED

Post-translational modifications for RNASE13 Gene

Other Protein References for RNASE13 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RNASE13 Gene

Domains for RNASE13 Gene

Gene Families for RNASE13 Gene

HGNC:
  • RNASE :Ribonucleases, RNase A

Protein Domains for RNASE13 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for RNASE13 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5GAN3

UniProtKB/Swiss-Prot:

RNS13_HUMAN
Family:
  • Belongs to the pancreatic ribonuclease family.:
    • Q5GAN3
genes like me logo Genes that share domains with RNASE13: view

Function for RNASE13 Gene

Molecular function for RNASE13 Gene

UniProtKB/Swiss-Prot Function: Does not exhibit any ribonuclease activity.

Gene Ontology (GO) - Molecular Function for RNASE13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0004519 endonuclease activity IBA --
GO:0004540 ribonuclease activity IBA --
genes like me logo Genes that share ontologies with RNASE13: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNASE13 Gene

Localization for RNASE13 Gene

Subcellular locations from UniProtKB/Swiss-Prot for RNASE13 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RNASE13 Gene COMPARTMENTS Subcellular localization image for RNASE13 gene
Compartment Confidence
extracellular 4

Gene Ontology (GO) - Cellular Components for RNASE13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with RNASE13: view

Pathways for RNASE13 Gene

SuperPathways for RNASE13 Gene

No Data Available

Interacting Proteins for RNASE13 Gene

Gene Ontology (GO) - Biological Process for RNASE13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0090305 nucleic acid phosphodiester bond hydrolysis IBA --
GO:0090501 RNA phosphodiester bond hydrolysis IBA --
genes like me logo Genes that share ontologies with RNASE13: view

No data available for Pathways by source for RNASE13 Gene

Transcripts for RNASE13 Gene

mRNA/cDNA for RNASE13 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RNASE13 Gene

Ribonuclease, RNase A family, 13 (non-active):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RNASE13 Gene

No ASD Table

Relevant External Links for RNASE13 Gene

GeneLoc Exon Structure for
RNASE13
ECgene alternative splicing isoforms for
RNASE13

Expression for RNASE13 Gene

mRNA expression in normal human tissues for RNASE13 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for RNASE13 Gene

SOURCE GeneReport for Unigene cluster for RNASE13 Gene Hs.666729

genes like me logo Genes that share expressions with RNASE13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RNASE13 Gene

Orthologs for RNASE13 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNASE13 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RNASE13 35
  • 99.36 (n)
  • 100 (a)
RNASE13 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RNASE13 35
  • 78 (n)
  • 67.32 (a)
RNASE13 36
  • 67 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RNASE13 35
  • 78.43 (n)
  • 71.9 (a)
RNASE13 36
  • 72 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rnase13 35
  • 77.56 (n)
  • 71.24 (a)
Rnase13 16
Rnase13 36
  • 71 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia RNASE13 36
  • 51 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RNASE13 36
  • 39 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rnase13 35
  • 75.6 (n)
  • 69.93 (a)
Species with no ortholog for RNASE13:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNASE13 Gene

ENSEMBL:
Gene Tree for RNASE13 (if available)
TreeFam:
Gene Tree for RNASE13 (if available)

Paralogs for RNASE13 Gene

No data available for Paralogs for RNASE13 Gene

Variants for RNASE13 Gene

Sequence variations from dbSNP and Humsavar for RNASE13 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
VAR_036874 -

Structural Variations from Database of Genomic Variants (DGV) for RNASE13 Gene

Variant ID Type Subtype PubMed ID
nsv428293 CNV Gain+Loss 18775914
nsv832740 CNV Gain 17160897

Relevant External Links for RNASE13 Gene

HapMap Linkage Disequilibrium report
RNASE13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RNASE13 Gene

Disorders for RNASE13 Gene

No disorders were found for RNASE13 Gene.

No data available for UniProtKB/Swiss-Prot for RNASE13 Gene

Publications for RNASE13 Gene

  1. The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories. (PMID: 15676279) Cho S. … Zhang J. (Genomics 2005) 3 4
  2. Comparative genomic analysis of eutherian ribonuclease A genes. (PMID: 24337645) Premzl M. (Mol. Genet. Genomics 2014) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RNASE13 Gene

Sources for RNASE13 Gene

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