Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNA5SP446 Gene

Subcategory (RNA class) for RNA5SP446 Gene


Aliases for RNA5SP446 Gene

  • RNA, 5S Ribosomal Pseudogene 446 2 3 5
  • RNA, 5S Ribosomal 446 2 3
  • RN5S446 3

External Ids for RNA5SP446 Gene

ORGUL Members for RNA5SP446 Gene

Previous HGNC Symbols for RNA5SP446 Gene

  • RN5S446

Previous GeneCards Identifiers for RNA5SP446 Gene

  • GC17P064893

Summaries for RNA5SP446 Gene

GeneCards Summary for RNA5SP446 Gene

RNA5SP446 (RNA, 5S Ribosomal Pseudogene 446) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP446 Gene

Genomics for RNA5SP446 Gene

Regulatory Elements for RNA5SP446 Gene

Enhancers for RNA5SP446 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G066906 1.1 Ensembl ENCODE 0.4 +11.3 11277 0.3 PKNOX1 CBX3 NFIB ZNF2 RAD21 YY1 ZNF143 RELB CREM ZNF654 CACNG5 RNA5SP446 GC17P066938
GH17G066904 0.9 Ensembl ENCODE 0.4 +9.8 9817 1.4 RFX1 SIN3A NR3C1 NR2F2 FOXA1 E2F1 JUND ZBTB48 HSF1 CACNG5 APOH PRKCA RNA5SP446 GC17P066938
GH17G066915 0.8 ENCODE 0.4 +19.8 19808 0.2 GTF2F1 CTCF JUN SIN3A ZBTB40 RAD21 GATA3 ELK1 POLR2A SMC3 CACNG5 MIR634 RNA5SP446 GC17P066938
GH17G066931 0.8 ENCODE 0.3 +35.7 35708 0.1 HDGF SIN3A ETS1 ZNF207 ZNF143 THAP11 HCFC1 CEBPB ELF4 NFYC GC17P066938 RNA5SP446
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP446 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP446 Gene

66,895,491 bp from pter
66,895,572 bp from pter
82 bases
Plus strand

Genomic View for RNA5SP446 Gene

Genes around RNA5SP446 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP446 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP446 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP446 Gene

Proteins for RNA5SP446 Gene

Post-translational modifications for RNA5SP446 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP446 Gene

Domains & Families for RNA5SP446 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP446 Gene

Function for RNA5SP446 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP446 Gene

Localization for RNA5SP446 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP446 Gene

Pathways & Interactions for RNA5SP446 Gene

SuperPathways for RNA5SP446 Gene

No Data Available

Interacting Proteins for RNA5SP446 Gene

Gene Ontology (GO) - Biological Process for RNA5SP446 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNA5SP446 Gene

Transcripts for RNA5SP446 Gene

mRNA/cDNA for RNA5SP446 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP446 Gene

No ASD Table

Relevant External Links for RNA5SP446 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNA5SP446 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP446 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP446 Gene

Orthologs for RNA5SP446 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5SP446 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 52 (a)
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 35
  • 49 (a)
(Mus musculus)
Mammalia Gm23084 35
  • 44 (a)
(Monodelphis domestica)
Mammalia 5S_rRNA 35
  • 41 (a)
(Gallus gallus)
Aves 5S_rRNA 35
  • 42 (a)
(Anolis carolinensis)
Reptilia 5S_rRNA 35
  • 45 (a)
Species where no ortholog for RNA5SP446 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP446 Gene

Gene Tree for RNA5SP446 (if available)
Gene Tree for RNA5SP446 (if available)

Paralogs for RNA5SP446 Gene

No data available for Paralogs for RNA5SP446 Gene

Variants for RNA5SP446 Gene

Relevant External Links for RNA5SP446 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP446 Gene

Disorders for RNA5SP446 Gene

No disorders were found for RNA5SP446 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP446 Gene

Publications for RNA5SP446 Gene

No publications were found for RNA5SP446 Gene.

Products for RNA5SP446 Gene

Sources for RNA5SP446 Gene

Loading form....