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Aliases for RNA5SP432 Gene

Subcategory (RNA class) for RNA5SP432 Gene

rRNA

Aliases for RNA5SP432 Gene

  • RNA, 5S Ribosomal Pseudogene 432 2 3 5
  • RNA, 5S Ribosomal 432 2 3
  • RN5S432 3

External Ids for RNA5SP432 Gene

ORGUL Members for RNA5SP432 Gene

Previous HGNC Symbols for RNA5SP432 Gene

  • RN5S432

Previous GeneCards Identifiers for RNA5SP432 Gene

  • GC16M084075

Summaries for RNA5SP432 Gene

GeneCards Summary for RNA5SP432 Gene

RNA5SP432 (RNA, 5S Ribosomal Pseudogene 432) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP432 Gene

Genomics for RNA5SP432 Gene

Regulatory Elements for RNA5SP432 Gene

Enhancers for RNA5SP432 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F083995 1.1 FANTOM5 Ensembl ENCODE 12.6 +44.3 44284 1.1 RFX1 MYNN CEBPB NFYC RAD21 EGR2 ZXDB NECAB2 DNAAF1 RNA5SP432 SLC38A8 HSDL1 ADAD2 PIR54401 GC16M084039
GH16F084013 0.5 Ensembl ENCODE 12.2 +25.8 25832 1.3 TBP HDGF ATF1 PKNOX1 CREB3L1 ARID4B SIN3A RAD21 SLC30A9 CREM RNA5SP432 SLC38A8 DNAAF1 HSDL1 GC16M084039 PIR54401
GH16F084062 0.2 ENCODE 12.2 -22.9 -22868 0.3 ELF3 PKNOX1 ATF1 MLX ARID4B ZNF48 ZSCAN9 RAD21 ZNF143 FOS RNA5SP432 MBTPS1 NECAB2 OSGIN1 TAF1C DNAAF1 HSDL1 MLYCD SLC38A8 ENSG00000274677
GH16F083992 0.8 Ensembl ENCODE 12 +46.1 46085 2.3 PKNOX1 ZFP64 ARID4B ZNF48 GATA2 FOS SMARCB1 MEF2D ATF4 PBX2 NECAB2 KLHL36 RNA5SP432 SLC38A8 OSGIN1 MLYCD ENSG00000261243 TAF1C ADAD2 ENSG00000260859
GH16F084082 0.8 Ensembl ENCODE 11.5 -42.9 -42887 1.4 HDGF PKNOX1 MLX CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 TAF1C SLC38A8 RNA5SP432 DNAAF1 HSDL1 ADAD2 CRISPLD2 ENSG00000260859 MBTPS1 ENSG00000274677
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNA5SP432 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP432 Gene

Chromosome:
16
Start:
84,039,918 bp from pter
End:
84,040,033 bp from pter
Size:
116 bases
Orientation:
Minus strand

Genomic View for RNA5SP432 Gene

Genes around RNA5SP432 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP432 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP432 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP432 Gene

Proteins for RNA5SP432 Gene

Post-translational modifications for RNA5SP432 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP432 Gene

Domains & Families for RNA5SP432 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP432 Gene

Function for RNA5SP432 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP432 Gene

Localization for RNA5SP432 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP432 Gene

Pathways & Interactions for RNA5SP432 Gene

SuperPathways for RNA5SP432 Gene

No Data Available

Interacting Proteins for RNA5SP432 Gene

Gene Ontology (GO) - Biological Process for RNA5SP432 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP432 Gene

Transcripts for RNA5SP432 Gene

mRNA/cDNA for RNA5SP432 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP432 Gene

No ASD Table

Relevant External Links for RNA5SP432 Gene

GeneLoc Exon Structure for
RNA5SP432
ECgene alternative splicing isoforms for
RNA5SP432

Expression for RNA5SP432 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5SP432 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP432 Gene:

RNA5SP432
genes like me logo Genes that share expression patterns with RNA5SP432: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNA5SP432 Gene

Orthologs for RNA5SP432 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP432 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 67 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 35
  • 62 (a)
ManyToMany
Species where no ortholog for RNA5SP432 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP432 Gene

ENSEMBL:
Gene Tree for RNA5SP432 (if available)
TreeFam:
Gene Tree for RNA5SP432 (if available)

Paralogs for RNA5SP432 Gene

No data available for Paralogs for RNA5SP432 Gene

Variants for RNA5SP432 Gene

Relevant External Links for RNA5SP432 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP432

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP432 Gene

Disorders for RNA5SP432 Gene

No disorders were found for RNA5SP432 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP432 Gene

Publications for RNA5SP432 Gene

No publications were found for RNA5SP432 Gene.

Products for RNA5SP432 Gene

Sources for RNA5SP432 Gene

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