Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNA5SP362 Gene

Aliases for RNA5SP362 Gene

  • RNA, 5S Ribosomal Pseudogene 362 2 3 5
  • RNA, 5S Ribosomal 362 2 3
  • RN5S362 3

External Ids for RNA5SP362 Gene

Previous HGNC Symbols for RNA5SP362 Gene

  • RN5S362

Previous GeneCards Identifiers for RNA5SP362 Gene

  • GC12P066462

Summaries for RNA5SP362 Gene

GeneCards Summary for RNA5SP362 Gene

RNA5SP362 (RNA, 5S Ribosomal Pseudogene 362) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP362 Gene

Genomics for RNA5SP362 Gene

Regulatory Elements for RNA5SP362 Gene

Enhancers for RNA5SP362 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F066065 1 Ensembl ENCODE 0.8 +0.1 137 1.4 ATF1 TBL1XR1 WRNIP1 FEZF1 ZNF48 RAD21 ZNF366 SCRT2 ETV6 ZNF391 LLPH-AS1 LEMD3 RNA5SP362
GH12F066061 0.6 Ensembl ENCODE 0.8 -4.0 -4026 1.2 ZNF316 ZNF362 LLPH-AS1 RNA5SP362 RPL21P18
GH12F066071 0.9 Ensembl ENCODE 0.4 +5.8 5820 0.7 MTA2 CHD1 BMI1 EBF1 TBX21 ZBTB40 ZNF366 IKZF1 STAT3 SPI1 LLPH-AS1 HMGA2 RPSAP52 RNA5SP362
GH12F066052 0.5 FANTOM5 0.4 -13.0 -13037 0.4 MTA2 CBX5 IKZF1 NBN EBF1 TBX21 ENSG00000250280 MSRB3 RPSAP52 HMGA2 LLPH-AS1 RNA5SP362 RPL21P18
GH12F066047 0.6 Ensembl ENCODE 0.3 -17.1 -17144 4.2 ATF1 MLX WRNIP1 ARID4B DMAP1 YY1 SLC30A9 CBX5 SP5 JUNB ENSG00000256083 LOC100129940 MSRB3 ENSG00000250280 HMGA2 RPSAP52 LLPH-AS1 RPL21P18 RNA5SP362
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNA5SP362 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP362 Gene

Chromosome:
12
Start:
66,066,221 bp from pter
End:
66,066,338 bp from pter
Size:
118 bases
Orientation:
Plus strand

Genomic View for RNA5SP362 Gene

Genes around RNA5SP362 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP362 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP362 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP362 Gene

Proteins for RNA5SP362 Gene

Post-translational modifications for RNA5SP362 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP362 Gene

Domains & Families for RNA5SP362 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP362 Gene

Function for RNA5SP362 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP362 Gene

Localization for RNA5SP362 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP362 Gene

Pathways & Interactions for RNA5SP362 Gene

SuperPathways for RNA5SP362 Gene

No Data Available

Interacting Proteins for RNA5SP362 Gene

Gene Ontology (GO) - Biological Process for RNA5SP362 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP362 Gene

Transcripts for RNA5SP362 Gene

mRNA/cDNA for RNA5SP362 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP362 Gene

No ASD Table

Relevant External Links for RNA5SP362 Gene

GeneLoc Exon Structure for
RNA5SP362
ECgene alternative splicing isoforms for
RNA5SP362

Expression for RNA5SP362 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5SP362 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP362 Gene:

RNA5SP362
genes like me logo Genes that share expression patterns with RNA5SP362: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNA5SP362 Gene

Orthologs for RNA5SP362 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5SP362 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 35
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 5S_rRNA 35
  • 57 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia 5S_rRNA 35
  • 57 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 35
  • 56 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23198 35
  • 49 (a)
ManyToMany
Gm23473 35
  • 45 (a)
ManyToMany
chicken
(Gallus gallus)
Aves 5S_rRNA 35
  • 59 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia 5S_rRNA 35
  • 46 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii 5S_rRNA 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35
  • 50 (a)
ManyToMany
Species where no ortholog for RNA5SP362 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNA5SP362 Gene

ENSEMBL:
Gene Tree for RNA5SP362 (if available)
TreeFam:
Gene Tree for RNA5SP362 (if available)

Paralogs for RNA5SP362 Gene

No data available for Paralogs for RNA5SP362 Gene

Variants for RNA5SP362 Gene

Relevant External Links for RNA5SP362 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP362

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP362 Gene

Disorders for RNA5SP362 Gene

No disorders were found for RNA5SP362 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP362 Gene

Publications for RNA5SP362 Gene

No publications were found for RNA5SP362 Gene.

Products for RNA5SP362 Gene

Sources for RNA5SP362 Gene

Content
Loading form....