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Aliases for RNA5SP285 Gene

Aliases for RNA5SP285 Gene

  • RNA, 5S Ribosomal Pseudogene 285 2 3 5
  • RNA, 5S Ribosomal 285 2 3
  • RN5S285 3

External Ids for RNA5SP285 Gene

Previous HGNC Symbols for RNA5SP285 Gene

  • RN5S285

Previous GeneCards Identifiers for RNA5SP285 Gene

  • GC09M074917

Summaries for RNA5SP285 Gene

GeneCards Summary for RNA5SP285 Gene

RNA5SP285 (RNA, 5S Ribosomal Pseudogene 285) is a Pseudogene.

Additional gene information for RNA5SP285 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP285 Gene

Genomics for RNA5SP285 Gene

Regulatory Elements for RNA5SP285 Gene

Enhancers for RNA5SP285 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H072300 0.7 FANTOM5 ENCODE 0.7 -1.3 -1302 0 ZNF24 LINC01504 ZFAND5 RNA5SP285
GH09H072292 1.1 Ensembl ENCODE 0.4 +5.5 5496 4 FOXA2 FEZF1 RAD21 GTF3C2 SCRT2 ZNF143 ZNF654 CEBPB ELF1 NFIC LINC01504 RNA5SP285 LOC100289320
GH09H072281 0.6 ENCODE 0.4 +18.7 18739 0 CTCF ZNF654 TRIM22 REST RAD21 ZNF143 SMC3 DEK TMC1 LOC100289320 RNA5SP285
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP285 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP285 Gene

Chromosome:
9
Start:
72,299,720 bp from pter
End:
72,299,838 bp from pter
Size:
119 bases
Orientation:
Minus strand

Genomic View for RNA5SP285 Gene

Genes around RNA5SP285 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP285 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP285 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP285 Gene

Proteins for RNA5SP285 Gene

Post-translational modifications for RNA5SP285 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP285 Gene

Domains & Families for RNA5SP285 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP285 Gene

Function for RNA5SP285 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNA5SP285
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP285 Gene

Localization for RNA5SP285 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP285 Gene

Pathways & Interactions for RNA5SP285 Gene

SuperPathways for RNA5SP285 Gene

No Data Available

Interacting Proteins for RNA5SP285 Gene

Gene Ontology (GO) - Biological Process for RNA5SP285 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP285 Gene

Drugs & Compounds for RNA5SP285 Gene

No Compound Related Data Available

Transcripts for RNA5SP285 Gene

mRNA/cDNA for RNA5SP285 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNA5SP285
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP285 Gene

No ASD Table

Relevant External Links for RNA5SP285 Gene

GeneLoc Exon Structure for
RNA5SP285
ECgene alternative splicing isoforms for
RNA5SP285

Expression for RNA5SP285 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP285 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP285 Gene:

RNA5SP285
genes like me logo Genes that share expression patterns with RNA5SP285: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP285 Gene

Orthologs for RNA5SP285 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP285 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 34
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 5S_rRNA 34
  • 65 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm23799 34
  • 61 (a)
OneToMany
Gm22093 34
  • 59 (a)
OneToMany
Gm23900 34
  • 56 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia 5S_rRNA 34
  • 50 (a)
ManyToMany
Species where no ortholog for RNA5SP285 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP285 Gene

ENSEMBL:
Gene Tree for RNA5SP285 (if available)
TreeFam:
Gene Tree for RNA5SP285 (if available)

Paralogs for RNA5SP285 Gene

No data available for Paralogs for RNA5SP285 Gene

Variants for RNA5SP285 Gene

Relevant External Links for RNA5SP285 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP285

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP285 Gene

Disorders for RNA5SP285 Gene

No disorders were found for RNA5SP285 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP285 Gene

Publications for RNA5SP285 Gene

No publications were found for RNA5SP285 Gene.

Products for RNA5SP285 Gene

Sources for RNA5SP285 Gene

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