Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNA5SP206 Gene

Aliases for RNA5SP206 Gene

  • RNA, 5S Ribosomal Pseudogene 206 2 3 5
  • RNA, 5S Ribosomal 206 2 3
  • RN5S206 3

External Ids for RNA5SP206 Gene

Previous HGNC Symbols for RNA5SP206 Gene

  • RN5S206

Summaries for RNA5SP206 Gene

GeneCards Summary for RNA5SP206 Gene

RNA5SP206 (RNA, 5S Ribosomal Pseudogene 206) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP206 Gene

Genomics for RNA5SP206 Gene

Regulatory Elements for RNA5SP206 Gene

Enhancers for RNA5SP206 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G032080 1.6 FANTOM5 ENCODE dbSUPER 0.7 -3.9 -3873 3.9 HDGF ATF1 PKNOX1 ARID4B DMAP1 ZNF48 ZNF2 TCF12 SLC30A9 GLIS2 HLA-DRB1 ATF6B CYP21A1P FKBPL TNXB PPT2 LY6G6C RNA5SP206
GH06G032075 1 Ensembl ENCODE 0.7 +2.2 2166 1.8 NFRKB ZKSCAN1 PATZ1 ZNF600 ZBTB20 ZNF639 ZNF280D ZNF362 HLF CEBPB TNXB ATF6B FKBPL PRRT1 PPT2 EGFL8 RNF5 AGPAT1 RNA5SP206 CYP21A2
GH06G032085 1.5 Ensembl ENCODE dbSUPER 0.4 -9.0 -8952 3.6 ZFP64 WRNIP1 SIN3A ARID4B ZNF48 CBX5 ZNF143 FOS SP5 ZHX2 HLA-DRB1 SKIV2L C4B BAG6 AGER ATF6B RNA5SP206 TNXB
GH06G032106 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -32.6 -32624 9.7 PKNOX1 SIN3A GATA2 ELK1 ZNF143 FOS ZNF263 SP3 REST SSRP1 C4A HLA-DRB1 ATF6B SKIV2L STK19 TNXA AGER CYP21A1P STK19B TNXB
GH06G032045 1.6 Ensembl ENCODE dbSUPER 0.3 +31.4 31376 3.1 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B DMAP1 ZNF2 SLC30A9 ZNF143 FOS C4A CYP21A1P TNXA CYP21A2 RNA5SP206
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP206 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP206 Gene

Chromosome:
6
Start:
32,078,508 bp from pter
End:
32,078,628 bp from pter
Size:
121 bases
Orientation:
Minus strand

Genomic View for RNA5SP206 Gene

Genes around RNA5SP206 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP206 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP206 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RNA5SP206 Gene

Post-translational modifications for RNA5SP206 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP206 Gene

Domains & Families for RNA5SP206 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP206 Gene

Function for RNA5SP206 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP206 Gene

Localization for RNA5SP206 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP206 Gene

Pathways & Interactions for RNA5SP206 Gene

SuperPathways for RNA5SP206 Gene

No Data Available

Interacting Proteins for RNA5SP206 Gene

Gene Ontology (GO) - Biological Process for RNA5SP206 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP206 Gene

Drugs & Compounds for RNA5SP206 Gene

No Compound Related Data Available

Transcripts for RNA5SP206 Gene

mRNA/cDNA for RNA5SP206 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP206 Gene

No ASD Table

Relevant External Links for RNA5SP206 Gene

GeneLoc Exon Structure for
RNA5SP206
ECgene alternative splicing isoforms for
RNA5SP206

Expression for RNA5SP206 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP206 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP206 Gene:

RNA5SP206
genes like me logo Genes that share expression patterns with RNA5SP206: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP206 Gene

Orthologs for RNA5SP206 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP206 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 35
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 5S_rRNA 35
  • 73 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22224 35
  • 63 (a)
OneToMany
Gm24808 35
  • 63 (a)
OneToMany
Species where no ortholog for RNA5SP206 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP206 Gene

ENSEMBL:
Gene Tree for RNA5SP206 (if available)
TreeFam:
Gene Tree for RNA5SP206 (if available)

Paralogs for RNA5SP206 Gene

No data available for Paralogs for RNA5SP206 Gene

Variants for RNA5SP206 Gene

Relevant External Links for RNA5SP206 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP206

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP206 Gene

Disorders for RNA5SP206 Gene

No disorders were found for RNA5SP206 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP206 Gene

Publications for RNA5SP206 Gene

No publications were found for RNA5SP206 Gene.

Products for RNA5SP206 Gene

Sources for RNA5SP206 Gene

Content
Loading form....