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Aliases for RNA5SP203 Gene

Aliases for RNA5SP203 Gene

  • RNA, 5S Ribosomal Pseudogene 203 2 3 5
  • RNA, 5S Ribosomal 203 2 3
  • RN5S203 3

External Ids for RNA5SP203 Gene

Previous HGNC Symbols for RNA5SP203 Gene

  • RN5S203

Summaries for RNA5SP203 Gene

GeneCards Summary for RNA5SP203 Gene

RNA5SP203 (RNA, 5S Ribosomal Pseudogene 203) is a Pseudogene.

Additional gene information for RNA5SP203 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP203 Gene

Genomics for RNA5SP203 Gene

GeneHancer (GH) Regulatory Elements for RNA5SP203 Gene

Promoters and enhancers for RNA5SP203 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I010750 Enhancer 0.7 dbSUPER 550.8 +1.5 1465 1.6 ATF1 PYGO2 RELA IRF9 ZNF766 DIDO1 CAVIN1 ZNF740 E2F5 NR4A1 RNA5SP203 TMEM14C ENSG00000272162 TMEM14B
GH06I010398 Promoter/Enhancer 3.4 VISTA UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 32.2 +343.0 343031 22.9 FEZF1 ZNF213 ZNF143 ZNF548 ZNF263 SP3 MEF2D ZNF610 GLIS1 NBN TFAP2A TFAP2A-AS1 RNA5SP203 ERVFRD-1 PAK1IP1 TMEM14C TMEM14B C6orf52
GH06I011042 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 24 -290.6 -290581 2.3 PKNOX1 ARNT ZNF133 ARID4B SIN3A GLI4 ZNF2 ZNF48 ZNF766 GLIS2 PIR47110 ELOVL2-AS1 ELOVL2 RNA5SP203 TFAP2A-AS1 SYCP2L GCM2 ENSG00000235051 HIVEP1 ERVFRD-1
GH06I010693 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 22.5 +58.1 58124 2.7 CLOCK MLX DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2D ZNF610 C6orf52 PAK1IP1 RNA5SP203 TMEM14C
GH06I010517 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.2 +231.6 231638 7.1 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 ZNF2 POLR2B ZNF766 GCNT2 LOC101928146 PAK1IP1 C6orf52 TMEM14B RNA5SP203 SYCP2L GC06M010576
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNA5SP203 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNA5SP203 Gene

Genomic Locations for RNA5SP203 Gene
chr6:10,752,791-10,752,926
(GRCh38/hg38)
Size:
136 bases
Orientation:
Minus strand
chr6:10,753,024-10,753,159
(GRCh37/hg19)

Genomic View for RNA5SP203 Gene

Genes around RNA5SP203 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP203 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP203 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP203 Gene

Proteins for RNA5SP203 Gene

Post-translational modifications for RNA5SP203 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP203 Gene

Domains & Families for RNA5SP203 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP203 Gene

Function for RNA5SP203 Gene

Phenotypes From GWAS Catalog for RNA5SP203 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP203 Gene

Localization for RNA5SP203 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP203 Gene

Pathways & Interactions for RNA5SP203 Gene

SuperPathways for RNA5SP203 Gene

No Data Available

Interacting Proteins for RNA5SP203 Gene

Gene Ontology (GO) - Biological Process for RNA5SP203 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP203 Gene

Drugs & Compounds for RNA5SP203 Gene

No Compound Related Data Available

Transcripts for RNA5SP203 Gene

mRNA/cDNA for RNA5SP203 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP203 Gene

No ASD Table

Relevant External Links for RNA5SP203 Gene

GeneLoc Exon Structure for
RNA5SP203
ECgene alternative splicing isoforms for
RNA5SP203

Expression for RNA5SP203 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP203 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP203 Gene:

RNA5SP203
genes like me logo Genes that share expression patterns with RNA5SP203: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP203 Gene

Orthologs for RNA5SP203 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5SP203 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 34
  • 93 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 5S_rRNA 34
  • 72 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia 5S_rRNA 34
  • 72 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22731 34
  • 66 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 34
  • 66 (a)
ManyToMany
chicken
(Gallus gallus)
Aves 5S_rRNA 34
  • 69 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia 5S_rRNA 34 34 34
  • 67 (a)
ManyToMany
Species where no ortholog for RNA5SP203 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP203 Gene

ENSEMBL:
Gene Tree for RNA5SP203 (if available)
TreeFam:
Gene Tree for RNA5SP203 (if available)

Paralogs for RNA5SP203 Gene

No data available for Paralogs for RNA5SP203 Gene

Variants for RNA5SP203 Gene

Additional Variant Information for RNA5SP203 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP203

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP203 Gene

Disorders for RNA5SP203 Gene

No disorders were found for RNA5SP203 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP203 Gene

Publications for RNA5SP203 Gene

No publications were found for RNA5SP203 Gene.

Products for RNA5SP203 Gene

Sources for RNA5SP203 Gene

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