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Aliases for RNA5SP196 Gene

Aliases for RNA5SP196 Gene

  • RNA, 5S Ribosomal Pseudogene 196 2 3
  • RNA, 5S Ribosomal 196 2 3
  • 5S Ribosomal RNA 5
  • 5S_rRNA 5
  • RN5S196 3

External Ids for RNA5SP196 Gene

Previous HGNC Symbols for RNA5SP196 Gene

  • RN5S196

Previous GeneCards Identifiers for RNA5SP196 Gene

  • GC05M145968

Summaries for RNA5SP196 Gene

GeneCards Summary for RNA5SP196 Gene

RNA5SP196 (RNA, 5S Ribosomal Pseudogene 196) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP196 Gene

Genomics for RNA5SP196 Gene

Regulatory Elements for RNA5SP196 Gene

Enhancers for RNA5SP196 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F146609 0.4 Ensembl 0.3 -23.6 -23605 0.6 ZNF316 MAFK RNA5SP196 RN7SL791P
GH05F146637 0.3 FANTOM5 0.2 -51.6 -51631 0.0 ZNF263 GPR151 PPP2R2B RN7SL791P RNA5SP196
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNA5SP196 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP196 Gene

Chromosome:
5
Start:
146,586,099 bp from pter
End:
146,586,200 bp from pter
Size:
102 bases
Orientation:
Minus strand

Genomic View for RNA5SP196 Gene

Genes around RNA5SP196 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP196 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP196 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP196 Gene

Proteins for RNA5SP196 Gene

Post-translational modifications for RNA5SP196 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP196 Gene

Domains & Families for RNA5SP196 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP196 Gene

Function for RNA5SP196 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP196 Gene

Localization for RNA5SP196 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP196 Gene

Pathways & Interactions for RNA5SP196 Gene

SuperPathways for RNA5SP196 Gene

No Data Available

Interacting Proteins for RNA5SP196 Gene

Gene Ontology (GO) - Biological Process for RNA5SP196 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP196 Gene

Transcripts for RNA5SP196 Gene

mRNA/cDNA for RNA5SP196 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP196 Gene

No ASD Table

Relevant External Links for RNA5SP196 Gene

GeneLoc Exon Structure for
RNA5SP196
ECgene alternative splicing isoforms for
RNA5SP196

Expression for RNA5SP196 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5SP196 Gene

mRNA differential expression in normal tissues according to GTEx for RNA5SP196 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x7.5), Brain - Frontal Cortex (BA9) (x7.4), Brain - Cortex (x6.4), Brain - Anterior cingulate cortex (BA24) (x5.9), Brain - Caudate (basal ganglia) (x4.4), and Brain - Amygdala (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP196 Gene:

RNA5SP196
genes like me logo Genes that share expression patterns with RNA5SP196: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNA5SP196 Gene

Orthologs for RNA5SP196 Gene

Evolution for RNA5SP196 Gene

ENSEMBL:
Gene Tree for RNA5SP196 (if available)
TreeFam:
Gene Tree for RNA5SP196 (if available)

No data available for Orthologs for RNA5SP196 Gene

Paralogs for RNA5SP196 Gene

No data available for Paralogs for RNA5SP196 Gene

Variants for RNA5SP196 Gene

Relevant External Links for RNA5SP196 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP196

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP196 Gene

Disorders for RNA5SP196 Gene

No disorders were found for RNA5SP196 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP196 Gene

Publications for RNA5SP196 Gene

No publications were found for RNA5SP196 Gene.

Products for RNA5SP196 Gene

Sources for RNA5SP196 Gene

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