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Aliases for RNA5SP192 Gene

Subcategory (RNA class) for RNA5SP192 Gene

rRNA

Aliases for RNA5SP192 Gene

  • RNA, 5S Ribosomal Pseudogene 192 2 3 5
  • RNA, 5S Ribosomal 192 2 3
  • RN5S192 3

External Ids for RNA5SP192 Gene

ORGUL Members for RNA5SP192 Gene

Previous HGNC Symbols for RNA5SP192 Gene

  • RN5S192

Previous GeneCards Identifiers for RNA5SP192 Gene

  • GC05P132185

Summaries for RNA5SP192 Gene

GeneCards Summary for RNA5SP192 Gene

RNA5SP192 (RNA, 5S Ribosomal Pseudogene 192) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP192 Gene

Genomics for RNA5SP192 Gene

Regulatory Elements for RNA5SP192 Gene

Enhancers for RNA5SP192 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F132818 1.2 Ensembl ENCODE 11.5 -28.8 -28775 2.2 ELF3 HDAC1 CBX3 ATF1 TBL1XR1 WRNIP1 ARID4B ZNF2 RAD21 YY1 GDF9 RNU7-15P RNA5SP192 UQCRQ CCNI2 KIF3A IL4 ENSG00000230612 SHROOM1 ENSG00000272203
GH05F132770 1.3 Ensembl ENCODE 10.6 -74.1 -74075 7.9 HDGF PKNOX1 ARID4B SIN3A ZNF48 YY1 GLIS2 CBX5 GATA2 ZNF143 SEPT8 CCNI2 KIF3A RAD50 ENSG00000224431 SOWAHA SHROOM1 TH2LCRR IL13 IL4
GH05F132384 1.3 Ensembl ENCODE 10.2 -460.9 -460893 6.6 HDGF WRNIP1 ARID4B SIN3A ZNF48 GLIS2 ELK1 ZNF143 ZNF207 FOS LOC553103 SLC22A5 C5orf56 IRF1 ENSG00000202533 LOC105379175 LOC102723741 SOWAHA IL5 RAD50
GH05F132806 1.2 Ensembl ENCODE 10.6 -41.2 -41177 2.0 WRNIP1 ZNF133 ARID4B YBX1 DMAP1 ZNF48 YY1 ZNF143 NFYC MXD4 GDF9 TH2LCRR RNU7-15P RNA5SP192 IL13 SEPT8 SOWAHA
GH05F132767 1.2 Ensembl ENCODE 10.6 -80.6 -80588 1.6 ATF1 PKNOX1 ARNT CREB3L1 ZNF766 GATA2 FOS JUNB NCOA1 TBX21 SEPT8 CCNI2 KIF3A SHROOM1 SOWAHA TH2LCRR IL4 RNU7-15P RNA5SP192 ENSG00000230612
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP192 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP192 Gene

Chromosome:
5
Start:
132,848,577 bp from pter
End:
132,848,696 bp from pter
Size:
120 bases
Orientation:
Plus strand

Genomic View for RNA5SP192 Gene

Genes around RNA5SP192 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP192 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP192 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP192 Gene

Proteins for RNA5SP192 Gene

Post-translational modifications for RNA5SP192 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP192 Gene

Domains & Families for RNA5SP192 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP192 Gene

Function for RNA5SP192 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP192 Gene

Localization for RNA5SP192 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP192 Gene

Pathways & Interactions for RNA5SP192 Gene

SuperPathways for RNA5SP192 Gene

No Data Available

Interacting Proteins for RNA5SP192 Gene

Gene Ontology (GO) - Biological Process for RNA5SP192 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP192 Gene

Transcripts for RNA5SP192 Gene

mRNA/cDNA for RNA5SP192 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP192 Gene

No ASD Table

Relevant External Links for RNA5SP192 Gene

GeneLoc Exon Structure for
RNA5SP192
ECgene alternative splicing isoforms for
RNA5SP192

Expression for RNA5SP192 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5SP192 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP192 Gene:

RNA5SP192
genes like me logo Genes that share expression patterns with RNA5SP192: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNA5SP192 Gene

Orthologs for RNA5SP192 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP192 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 35
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 5S_rRNA 35
  • 70 (a)
OneToMany
mouse
(Mus musculus)
Mammalia n-R5s61 35
  • 64 (a)
ManyToMany
Species where no ortholog for RNA5SP192 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP192 Gene

ENSEMBL:
Gene Tree for RNA5SP192 (if available)
TreeFam:
Gene Tree for RNA5SP192 (if available)

Paralogs for RNA5SP192 Gene

No data available for Paralogs for RNA5SP192 Gene

Variants for RNA5SP192 Gene

Relevant External Links for RNA5SP192 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP192

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP192 Gene

Disorders for RNA5SP192 Gene

No disorders were found for RNA5SP192 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP192 Gene

Publications for RNA5SP192 Gene

No publications were found for RNA5SP192 Gene.

Products for RNA5SP192 Gene

Sources for RNA5SP192 Gene

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