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Aliases for RNA5SP185 Gene

Subcategory (RNA class) for RNA5SP185 Gene

rRNA

Aliases for RNA5SP185 Gene

  • RNA, 5S Ribosomal Pseudogene 185 2 3 5
  • RNA, 5S Ribosomal 185 2 3
  • RN5S185 3

External Ids for RNA5SP185 Gene

ORGUL Members for RNA5SP185 Gene

Previous HGNC Symbols for RNA5SP185 Gene

  • RN5S185

Previous GeneCards Identifiers for RNA5SP185 Gene

  • GC05M055559

Summaries for RNA5SP185 Gene

GeneCards Summary for RNA5SP185 Gene

RNA5SP185 (RNA, 5S Ribosomal Pseudogene 185) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP185 Gene

Genomics for RNA5SP185 Gene

Regulatory Elements for RNA5SP185 Gene

Enhancers for RNA5SP185 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G056258 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +1.3 1325 1.6 EBF1 RELA FOSL1 ZFHX2 PCBP1 RELB FOS IKZF2 MAFK EGR2 ANKRD55 ENSG00000237705 LINC01948 RNA5SP185 GC05M056261
GH05G056270 1.4 Ensembl ENCODE dbSUPER 0.4 -10.4 -10430 1.7 ELF3 RB1 ARID4B ZNF2 ZNF48 RAD21 RFX5 ZNF366 ZNF143 ZNF207 LINC01948 ENSG00000238326 PSMC1P4 RNA5SP185 GC05M056261
GH05G056251 1 ENCODE 0.4 +8.5 8461 1.1 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 NCOA1 NFIL3 MBD2 SMARCA4 RNU6ATAC2P ENSG00000237705 LINC01948 RNA5SP185 GC05M056261 ANKRD55
GH05G056269 0.7 ENCODE 0.4 -9.2 -9223 0.2 GATAD2A CTCF NR2F1 WRNIP1 TRIM22 ZNF384 GATAD2B REST EBF1 TBX21 LINC01948 ENSG00000238326 PSMC1P4 GC05M056261 RNA5SP185
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP185 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP185 Gene

Chromosome:
5
Start:
56,260,333 bp from pter
End:
56,260,446 bp from pter
Size:
114 bases
Orientation:
Minus strand

Genomic View for RNA5SP185 Gene

Genes around RNA5SP185 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP185 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP185 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP185 Gene

Proteins for RNA5SP185 Gene

Post-translational modifications for RNA5SP185 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP185 Gene

Domains & Families for RNA5SP185 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP185 Gene

Function for RNA5SP185 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP185 Gene

Localization for RNA5SP185 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP185 Gene

Pathways & Interactions for RNA5SP185 Gene

SuperPathways for RNA5SP185 Gene

No Data Available

Interacting Proteins for RNA5SP185 Gene

Gene Ontology (GO) - Biological Process for RNA5SP185 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP185 Gene

Drugs & Compounds for RNA5SP185 Gene

No Compound Related Data Available

Transcripts for RNA5SP185 Gene

mRNA/cDNA for RNA5SP185 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP185 Gene

No ASD Table

Relevant External Links for RNA5SP185 Gene

GeneLoc Exon Structure for
RNA5SP185
ECgene alternative splicing isoforms for
RNA5SP185

Expression for RNA5SP185 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP185 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP185 Gene:

RNA5SP185
genes like me logo Genes that share expression patterns with RNA5SP185: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP185 Gene

Orthologs for RNA5SP185 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5SP185 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 5S_rRNA 35
  • 69 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25712 35
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 35
  • 63 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 58 (a)
OneToOne
chicken
(Gallus gallus)
Aves 5S_rRNA 35 35 35
  • 68 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia 5S_rRNA 35
  • 73 (a)
OneToOne
Species where no ortholog for RNA5SP185 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP185 Gene

ENSEMBL:
Gene Tree for RNA5SP185 (if available)
TreeFam:
Gene Tree for RNA5SP185 (if available)

Paralogs for RNA5SP185 Gene

No data available for Paralogs for RNA5SP185 Gene

Variants for RNA5SP185 Gene

Relevant External Links for RNA5SP185 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP185

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP185 Gene

Disorders for RNA5SP185 Gene

No disorders were found for RNA5SP185 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP185 Gene

Publications for RNA5SP185 Gene

No publications were found for RNA5SP185 Gene.

Products for RNA5SP185 Gene

Sources for RNA5SP185 Gene

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