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Aliases for RNA5SP184 Gene

Aliases for RNA5SP184 Gene

  • RNA, 5S Ribosomal Pseudogene 184 2 3 5
  • RNA, 5S Ribosomal 184 2 3
  • RN5S184 3

External Ids for RNA5SP184 Gene

Previous HGNC Symbols for RNA5SP184 Gene

  • RN5S184

Previous GeneCards Identifiers for RNA5SP184 Gene

  • GC05M055443

Summaries for RNA5SP184 Gene

GeneCards Summary for RNA5SP184 Gene

RNA5SP184 (RNA, 5S Ribosomal Pseudogene 184) is a Pseudogene.

Additional gene information for RNA5SP184 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP184 Gene

Genomics for RNA5SP184 Gene

GeneHancer (GH) Regulatory Elements for RNA5SP184 Gene

Promoters and enhancers for RNA5SP184 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I056146 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.3 -1345 2.4 SMAD1 RB1 EBF1 BMI1 BATF IRF4 RELA ZKSCAN1 ZNF316 ATF7 RNA5SP184 RNU6-299P FLJ31104 IL6ST ENSG00000238326 C1GALT1P2 ANKRD55
GH05I056142 Enhancer 0.9 ENCODE dbSUPER 0.8 +3.7 3713 1.4 SOX13 PKNOX1 SMAD1 MAX EBF1 THRB RAD21 YY1 RELA CTBP1 IL6ST FLJ31104 RNA5SP184 RPL17P22 ANKRD55
GH05I056161 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.1 -15137 0.9 ATF1 FOXA2 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 NCOA1 MBD2 RNA5SP184 C1GALT1P2 ANKRD55
GH05I056154 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -11.0 -10958 6.7 HDAC1 PKNOX1 RB1 IRF4 RARA TCF12 ZNF766 SCRT2 ATF7 IKZF2 DHX29 MIER3 MTREX ENSG00000271828 RPL26P19 RNA5SP184 C1GALT1P2 ANKRD55
GH05I056151 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.7 -5666 1.1 SRF ZNF687 NR2F1 TRIM22 BMI1 ELF1 DPF2 RAD21 ZNF217 TARDBP RNU6-299P FLJ31104 IL6ST ENSG00000238326 RNA5SP184 C1GALT1P2 ANKRD55
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNA5SP184 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNA5SP184 Gene

Genomic Locations for RNA5SP184 Gene
chr5:56,146,739-56,146,846
(GRCh38/hg38)
Size:
108 bases
Orientation:
Minus strand
chr5:55,442,566-55,442,673
(GRCh37/hg19)

Genomic View for RNA5SP184 Gene

Genes around RNA5SP184 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP184 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP184 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP184 Gene

Proteins for RNA5SP184 Gene

Post-translational modifications for RNA5SP184 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP184 Gene

Domains & Families for RNA5SP184 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP184 Gene

Function for RNA5SP184 Gene

Phenotypes From GWAS Catalog for RNA5SP184 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP184 Gene

Localization for RNA5SP184 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP184 Gene

Pathways & Interactions for RNA5SP184 Gene

SuperPathways for RNA5SP184 Gene

No Data Available

Interacting Proteins for RNA5SP184 Gene

Gene Ontology (GO) - Biological Process for RNA5SP184 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP184 Gene

Drugs & Compounds for RNA5SP184 Gene

No Compound Related Data Available

Transcripts for RNA5SP184 Gene

mRNA/cDNA for RNA5SP184 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP184 Gene

No ASD Table

Relevant External Links for RNA5SP184 Gene

GeneLoc Exon Structure for
RNA5SP184
ECgene alternative splicing isoforms for
RNA5SP184

Expression for RNA5SP184 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP184 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP184 Gene:

RNA5SP184
genes like me logo Genes that share expression patterns with RNA5SP184: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP184 Gene

Orthologs for RNA5SP184 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP184 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 34
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 5S_rRNA 34
  • 67 (a)
OneToMany
cow
(Bos Taurus)
Mammalia 5S_rRNA 34
  • 66 (a)
OneToOne
mouse
(Mus musculus)
Mammalia n-R5s191 34
  • 58 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 34
  • 57 (a)
OneToMany
Species where no ortholog for RNA5SP184 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP184 Gene

ENSEMBL:
Gene Tree for RNA5SP184 (if available)
TreeFam:
Gene Tree for RNA5SP184 (if available)

Paralogs for RNA5SP184 Gene

No data available for Paralogs for RNA5SP184 Gene

Variants for RNA5SP184 Gene

Additional Variant Information for RNA5SP184 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP184

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP184 Gene

Disorders for RNA5SP184 Gene

No disorders were found for RNA5SP184 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP184 Gene

Publications for RNA5SP184 Gene

No publications were found for RNA5SP184 Gene.

Products for RNA5SP184 Gene

Sources for RNA5SP184 Gene

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