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Aliases for RNA5SP133 Gene

Subcategory (RNA class) for RNA5SP133 Gene


Aliases for RNA5SP133 Gene

  • RNA, 5S Ribosomal Pseudogene 133 2 3 5
  • RNA, 5S Ribosomal 133 2 3
  • RN5S133 3

External Ids for RNA5SP133 Gene

ORGUL Members for RNA5SP133 Gene

Previous HGNC Symbols for RNA5SP133 Gene

  • RN5S133

Summaries for RNA5SP133 Gene

GeneCards Summary for RNA5SP133 Gene

RNA5SP133 (RNA, 5S Ribosomal Pseudogene 133) is a Pseudogene, and is affiliated with the rRNA class.

Additional gene information for RNA5SP133 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP133 Gene

Genomics for RNA5SP133 Gene

Regulatory Elements for RNA5SP133 Gene

Enhancers for RNA5SP133 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H056124 1.3 FANTOM5 Ensembl ENCODE 0.2 -60.0 -59991 1 PKNOX1 JUN ZNF133 RFX5 FOSL1 POLR2A ZBTB48 SCRT2 FOSL2 PRDM10 GC03P056111 RNA5SP133
GH03H056156 0.8 Ensembl ENCODE 0.3 -27.5 -27489 1 POLR2A GLIS1 IKZF1 MAX MYC RNA5SP133 GC03P056111
GH03H056130 1.1 Ensembl ENCODE 0.2 -52.7 -52688 3 PKNOX1 RAD21 RFX5 ZSCAN5C RCOR1 FOS SMARCC1 CEBPB ZEB2 PRDM6 GC03P056111 RNA5SP133
GH03H056125 0.7 FANTOM5 ENCODE 0.2 -61.4 -61367 0 POU5F1 CTBP2 GC03P056111 RNA5SP133
GH03H056144 0.4 ENCODE 0.3 -40.1 -40057 1 ATF7 ATF2 GC03P056111 RNA5SP133
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP133 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP133 Gene

56,185,104 bp from pter
56,185,222 bp from pter
119 bases
Plus strand

Genomic View for RNA5SP133 Gene

Genes around RNA5SP133 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP133 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP133 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP133 Gene

Proteins for RNA5SP133 Gene

Post-translational modifications for RNA5SP133 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP133 Gene

Domains & Families for RNA5SP133 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP133 Gene

Function for RNA5SP133 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNA5SP133
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP133 Gene

Localization for RNA5SP133 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP133 Gene

Pathways & Interactions for RNA5SP133 Gene

SuperPathways for RNA5SP133 Gene

No Data Available

Interacting Proteins for RNA5SP133 Gene

Gene Ontology (GO) - Biological Process for RNA5SP133 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNA5SP133 Gene

Drugs & Compounds for RNA5SP133 Gene

No Compound Related Data Available

Transcripts for RNA5SP133 Gene

mRNA/cDNA for RNA5SP133 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNA5SP133
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP133 Gene

No ASD Table

Relevant External Links for RNA5SP133 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNA5SP133 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP133 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP133 Gene:

genes like me logo Genes that share expression patterns with RNA5SP133: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP133 Gene

Orthologs for RNA5SP133 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5SP133 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia 5S_rRNA 34
  • 92 (a)
(Canis familiaris)
Mammalia 5S_rRNA 34
  • 68 (a)
(Bos Taurus)
Mammalia 5S_rRNA 34
  • 67 (a)
(Mus musculus)
Mammalia n-R5s205 34
  • 65 (a)
(Monodelphis domestica)
Mammalia 5S_rRNA 34
  • 58 (a)
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 34
  • 53 (a)
(Anolis carolinensis)
Reptilia 5S_rRNA 34
  • 59 (a)
(Danio rerio)
Actinopterygii 5S_rRNA 34
  • 39 (a)
Species where no ortholog for RNA5SP133 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNA5SP133 Gene

Gene Tree for RNA5SP133 (if available)
Gene Tree for RNA5SP133 (if available)

Paralogs for RNA5SP133 Gene

No data available for Paralogs for RNA5SP133 Gene

Variants for RNA5SP133 Gene

Relevant External Links for RNA5SP133 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP133 Gene

Disorders for RNA5SP133 Gene

No disorders were found for RNA5SP133 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP133 Gene

Publications for RNA5SP133 Gene

No publications were found for RNA5SP133 Gene.

Products for RNA5SP133 Gene

Sources for RNA5SP133 Gene

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