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Aliases for RNA5SP123 Gene

Subcategory (RNA class) for RNA5SP123 Gene


Aliases for RNA5SP123 Gene

  • RNA, 5S Ribosomal Pseudogene 123 2 3 5
  • RNA, 5S Ribosomal 123 2 3
  • RN5S123 3

External Ids for RNA5SP123 Gene

ORGUL Members for RNA5SP123 Gene

Previous HGNC Symbols for RNA5SP123 Gene

  • RN5S123

Previous GeneCards Identifiers for RNA5SP123 Gene

  • GC03M012557
  • GC03M012558
  • GC03M012562

Summaries for RNA5SP123 Gene

GeneCards Summary for RNA5SP123 Gene

RNA5SP123 (RNA, 5S Ribosomal Pseudogene 123) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP123 Gene

Genomics for RNA5SP123 Gene

Regulatory Elements for RNA5SP123 Gene

Enhancers for RNA5SP123 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F012579 0.8 FANTOM5 ENCODE 10.2 -68.8 -68769 0.9 ZNF316 RAD21 EMSY NR2C2 YY1 MKRN2 RNA5SP123 RNU6-377P RPL32 ENSG00000274514 GC03P012583
GH03F012487 0.4 Ensembl 11.7 +23.9 23913 0.2 CEBPB SPI1 RNA5SP123 RNU6-377P TIMP4 SYN2 TSEN2 GC03M012511
GH03F012489 0.2 ENCODE 11.7 +21.0 20978 1.8 TIMP4 TSEN2 RNA5SP123 RNU6-377P SYN2 GC03M012511
GH03F012507 1 Ensembl ENCODE 0.8 +2.7 2733 2.6 JUN SIN3A ZIC2 ZKSCAN1 ZNF664 ZNF121 ZNF316 POLR2A FOS MAFK TSEN2 MKRN2 TIMP4 SYN2 RNA5SP123 GC03M012511
GH03F012500 0.4 ENCODE 0.4 +9.6 9644 1.6 USF2 CEBPB TSEN2 GC03M012511 RNA5SP123
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNA5SP123 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5SP123 Gene

12,511,095 bp from pter
12,511,213 bp from pter
119 bases
Minus strand

Genomic View for RNA5SP123 Gene

Genes around RNA5SP123 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP123 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP123 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP123 Gene

Proteins for RNA5SP123 Gene

Post-translational modifications for RNA5SP123 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP123 Gene

Domains & Families for RNA5SP123 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP123 Gene

Function for RNA5SP123 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP123 Gene

Localization for RNA5SP123 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5SP123 Gene

Pathways & Interactions for RNA5SP123 Gene

SuperPathways for RNA5SP123 Gene

No Data Available

Interacting Proteins for RNA5SP123 Gene

Gene Ontology (GO) - Biological Process for RNA5SP123 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNA5SP123 Gene

Transcripts for RNA5SP123 Gene

mRNA/cDNA for RNA5SP123 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP123 Gene

No ASD Table

Relevant External Links for RNA5SP123 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNA5SP123 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5SP123 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP123 Gene:

genes like me logo Genes that share expression patterns with RNA5SP123: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNA5SP123 Gene

Orthologs for RNA5SP123 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP123 Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia 5S_rRNA 35
  • 86 (a)
(Monodelphis domestica)
Mammalia 5S_rRNA 35
  • 84 (a)
(Bos Taurus)
Mammalia 5S_rRNA 35
  • 79 (a)
(Mus musculus)
Mammalia n-R5s15 35
  • 77 (a)
(Ornithorhynchus anatinus)
Mammalia 5S_rRNA 35
  • 73 (a)
(Pan troglodytes)
Mammalia 5S_rRNA 35 35 35 35 35 35 35 35
  • 70 (a)
Species where no ortholog for RNA5SP123 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP123 Gene

Gene Tree for RNA5SP123 (if available)
Gene Tree for RNA5SP123 (if available)

Paralogs for RNA5SP123 Gene

No data available for Paralogs for RNA5SP123 Gene

Variants for RNA5SP123 Gene

Relevant External Links for RNA5SP123 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP123 Gene

Disorders for RNA5SP123 Gene

No disorders were found for RNA5SP123 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP123 Gene

Publications for RNA5SP123 Gene

No publications were found for RNA5SP123 Gene.

Products for RNA5SP123 Gene

Sources for RNA5SP123 Gene

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