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Aliases for RNA5-8SP6 Gene

Subcategory (RNA class) for RNA5-8SP6 Gene

rRNA

Aliases for RNA5-8SP6 Gene

  • RNA, 5.8S Ribosomal Pseudogene 6 2 3
  • RNA, 5.8S Ribosomal 6 2 3
  • RN5-8S6 3

External Ids for RNA5-8SP6 Gene

ORGUL Members for RNA5-8SP6 Gene

Previous HGNC Symbols for RNA5-8SP6 Gene

  • RN5-8S6

Previous GeneCards Identifiers for RNA5-8SP6 Gene

  • GC0YP010044
  • GC0YP010051
  • GC0YP010058
  • GC0YP010069

Summaries for RNA5-8SP6 Gene

GeneCards Summary for RNA5-8SP6 Gene

RNA5-8SP6 (RNA, 5.8S Ribosomal Pseudogene 6) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5-8SP6 Gene

Genomics for RNA5-8SP6 Gene

Genomic Location for RNA5-8SP6 Gene

Start:
10,200,155 bp from pter
End:
10,200,306 bp from pter
Size:
152 bases
Orientation:
Plus strand

Genomic View for RNA5-8SP6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNA5-8SP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5-8SP6 Gene

No data available for Regulatory Elements for RNA5-8SP6 Gene

Proteins for RNA5-8SP6 Gene

Post-translational modifications for RNA5-8SP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5-8SP6 Gene

Domains for RNA5-8SP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5-8SP6 Gene

Function for RNA5-8SP6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNA5-8SP6 Gene

Localization for RNA5-8SP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5-8SP6 Gene

Pathways for RNA5-8SP6 Gene

SuperPathways for RNA5-8SP6 Gene

No Data Available

Interacting Proteins for RNA5-8SP6 Gene

Gene Ontology (GO) - Biological Process for RNA5-8SP6 Gene

None

No data available for Pathways by source for RNA5-8SP6 Gene

Transcripts for RNA5-8SP6 Gene

mRNA/cDNA for RNA5-8SP6 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5-8SP6 Gene

No ASD Table

Relevant External Links for RNA5-8SP6 Gene

GeneLoc Exon Structure for
RNA5-8SP6
ECgene alternative splicing isoforms for
RNA5-8SP6

Expression for RNA5-8SP6 Gene

mRNA expression in normal human tissues for RNA5-8SP6 Gene

genes like me logo Genes that share expressions with RNA5-8SP6: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RNA5-8SP6 Gene

Orthologs for RNA5-8SP6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5-8SP6 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5_8S_rRNA 36
  • 99 (a)
OneToMany
5_8S_rRNA 36
  • 99 (a)
OneToMany
5_8S_rRNA 36
  • 99 (a)
OneToMany
cow
(Bos Taurus)
Mammalia 5_8S_rRNA 36
  • 93 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia 5_8S_rRNA 36
  • 77 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia 5_8S_rRNA 36
  • 93 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia 5_8S_rRNA 36
  • 93 (a)
ManyToMany
5_8S_rRNA 36
  • 93 (a)
ManyToMany
5_8S_rRNA 36
  • 93 (a)
ManyToMany
5_8S_rRNA 36
  • 90 (a)
ManyToMany
5_8S_rRNA 36
  • 86 (a)
ManyToMany
5_8S_rRNA 36
  • 93 (a)
ManyToMany
5_8S_rRNA 36
  • 87 (a)
ManyToMany
5_8S_rRNA 36
  • 93 (a)
ManyToMany
chicken
(Gallus gallus)
Aves 5_8S_rRNA 36
  • 88 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii 5_8S_rRNA 36
  • 79 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea 5_8S_rRNA 36
  • 75 (a)
OneToMany
Species with no ortholog for RNA5-8SP6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNA5-8SP6 Gene

ENSEMBL:
Gene Tree for RNA5-8SP6 (if available)
TreeFam:
Gene Tree for RNA5-8SP6 (if available)

Paralogs for RNA5-8SP6 Gene

No data available for Paralogs for RNA5-8SP6 Gene

Variants for RNA5-8SP6 Gene

Relevant External Links for RNA5-8SP6 Gene

HapMap Linkage Disequilibrium report
RNA5-8SP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RNA5-8SP6 Gene

Disorders for RNA5-8SP6 Gene

No disorders were found for RNA5-8SP6 Gene.

No data available for UniProtKB/Swiss-Prot for RNA5-8SP6 Gene

Publications for RNA5-8SP6 Gene

No publications were found for RNA5-8SP6 Gene.

Products for RNA5-8SP6 Gene

Sources for RNA5-8SP6 Gene

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