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Aliases for RNA5-8SP6 Gene

Subcategory (RNA class) for RNA5-8SP6 Gene


Aliases for RNA5-8SP6 Gene

  • RNA, 5.8S Ribosomal Pseudogene 6 2 3 5
  • RNA, 5.8S Ribosomal 6 2 3
  • RN5-8S6 3

External Ids for RNA5-8SP6 Gene

ORGUL Members for RNA5-8SP6 Gene

Previous HGNC Symbols for RNA5-8SP6 Gene

  • RN5-8S6

Previous GeneCards Identifiers for RNA5-8SP6 Gene

  • GC0YP010044
  • GC0YP010051
  • GC0YP010058
  • GC0YP010069

Summaries for RNA5-8SP6 Gene

GeneCards Summary for RNA5-8SP6 Gene

RNA5-8SP6 (RNA, 5.8S Ribosomal Pseudogene 6) is a Pseudogene, and is affiliated with the rRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5-8SP6 Gene

Genomics for RNA5-8SP6 Gene

Regulatory Elements for RNA5-8SP6 Gene

Enhancers for RNA5-8SP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YF010200 1 ENCODE 0.8 +0.1 55 0.3 GC0YP010207 GC0YP010209 GC0YP010211 PIR43677 RNA5-8SP6
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNA5-8SP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNA5-8SP6 Gene

10,200,155 bp from pter
10,200,306 bp from pter
152 bases
Plus strand

Genomic View for RNA5-8SP6 Gene

Genes around RNA5-8SP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5-8SP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5-8SP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5-8SP6 Gene

Proteins for RNA5-8SP6 Gene

Post-translational modifications for RNA5-8SP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5-8SP6 Gene

Domains & Families for RNA5-8SP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5-8SP6 Gene

Function for RNA5-8SP6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5-8SP6 Gene

Localization for RNA5-8SP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5-8SP6 Gene

Pathways & Interactions for RNA5-8SP6 Gene

SuperPathways for RNA5-8SP6 Gene

No Data Available

Interacting Proteins for RNA5-8SP6 Gene

Gene Ontology (GO) - Biological Process for RNA5-8SP6 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNA5-8SP6 Gene

Transcripts for RNA5-8SP6 Gene

mRNA/cDNA for RNA5-8SP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5-8SP6 Gene

No ASD Table

Relevant External Links for RNA5-8SP6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNA5-8SP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5-8SP6 Gene

genes like me logo Genes that share expression patterns with RNA5-8SP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNA5-8SP6 Gene

Orthologs for RNA5-8SP6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5-8SP6 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia 5_8S_rRNA 35 35 35
  • 99 (a)
(Bos Taurus)
Mammalia 5_8S_rRNA 35
  • 93 (a)
(Monodelphis domestica)
Mammalia 5_8S_rRNA 35
  • 93 (a)
(Ornithorhynchus anatinus)
Mammalia 5_8S_rRNA 35 35 35 35 35 35 35 35
  • 93 (a)
(Canis familiaris)
Mammalia 5_8S_rRNA 35
  • 77 (a)
(Gallus gallus)
Aves 5_8S_rRNA 35
  • 88 (a)
(Danio rerio)
Actinopterygii 5_8S_rRNA 35
  • 79 (a)
sea squirt
(Ciona savignyi)
Ascidiacea 5_8S_rRNA 35
  • 75 (a)
Species where no ortholog for RNA5-8SP6 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNA5-8SP6 Gene

Gene Tree for RNA5-8SP6 (if available)
Gene Tree for RNA5-8SP6 (if available)

Paralogs for RNA5-8SP6 Gene

No data available for Paralogs for RNA5-8SP6 Gene

Variants for RNA5-8SP6 Gene

Relevant External Links for RNA5-8SP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5-8SP6 Gene

Disorders for RNA5-8SP6 Gene

No disorders were found for RNA5-8SP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5-8SP6 Gene

Publications for RNA5-8SP6 Gene

No publications were found for RNA5-8SP6 Gene.

Products for RNA5-8SP6 Gene

Sources for RNA5-8SP6 Gene

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