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Aliases for RNA5-8S5 Gene

Subcategory (RNA class) for RNA5-8S5 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RNA5-8S5 Gene

  • RNA, 5.8S Ribosomal 5 2 3
  • RNA, 5.8S Ribosomal 1 3
  • 5.8S Ribosomal RNA 3
  • RN5-8S1 3

External Ids for RNA5-8S5 Gene

Previous HGNC Symbols for RNA5-8S5 Gene

  • RN5-8S1

Previous GeneCards Identifiers for RNA5-8S5 Gene

  • GC00P6C0114
  • GC00P6C0116
  • GC00P6C0118
  • GC00P6C0120
  • GC00P6C0122

Summaries for RNA5-8S5 Gene

Entrez Gene Summary for RNA5-8S5 Gene

  • The sequences coding for ribosomal RNAs are present as rDNA repeating units, designated RNR1 through RNR5, in the p12 region of chromosomes 13, 14, 15, 21 and 22. A 45S rRNA which serves as the precursor for the 18S, 5.8S and 28S rRNA, is transcribed from each rDNA unit by RNA polymerase I. The number of rDNA repeating units varies between individuals and from chromosome to chromosome, although usually 30 to 40 repeats are found on each chromosome. These ribosomal repeating units are not currently annotated on the reference genome. This gene represents the portion of one rDNA repeat which encodes a 5.8S rRNA.[provided by RefSeq, Mar 2009]

GeneCards Summary for RNA5-8S5 Gene

RNA5-8S5 (RNA, 5.8S Ribosomal 5) is an RNA Gene, and is affiliated with the non-coding RNA class. Among its related pathways are Viral mRNA Translation.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5-8S5 Gene

Genomics for RNA5-8S5 Gene

Genomic Location for RNA5-8S5 Gene

No location information available

Genomic View for RNA5-8S5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:

RefSeq DNA sequence for RNA5-8S5 Gene

No data available for Regulatory Elements for RNA5-8S5 Gene

Proteins for RNA5-8S5 Gene

Post-translational modifications for RNA5-8S5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5-8S5 Gene

Domains & Families for RNA5-8S5 Gene

Gene Families for RNA5-8S5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNA5-8S5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5-8S5 Gene

Function for RNA5-8S5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5-8S5 Gene

Localization for RNA5-8S5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5-8S5 Gene

Pathways & Interactions for RNA5-8S5 Gene

genes like me logo Genes that share pathways with RNA5-8S5: view

Pathways by source for RNA5-8S5 Gene

1 GeneGo (Thomson Reuters) pathway for RNA5-8S5 Gene

Interacting Proteins for RNA5-8S5 Gene

Gene Ontology (GO) - Biological Process for RNA5-8S5 Gene


No data available for SIGNOR curated interactions for RNA5-8S5 Gene

Drugs & Compounds for RNA5-8S5 Gene

No Compound Related Data Available

Transcripts for RNA5-8S5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5-8S5 Gene

No ASD Table

Relevant External Links for RNA5-8S5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for RNA5-8S5 Gene

Expression for RNA5-8S5 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNA5-8S5 Gene

Orthologs for RNA5-8S5 Gene

No data available for Orthologs and Evolution for RNA5-8S5 Gene

Paralogs for RNA5-8S5 Gene

No data available for Paralogs for RNA5-8S5 Gene

Variants for RNA5-8S5 Gene

Relevant External Links for RNA5-8S5 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5-8S5 Gene

Disorders for RNA5-8S5 Gene

Relevant External Links for RNA5-8S5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with RNA5-8S5: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNA5-8S5 Gene

Publications for RNA5-8S5 Gene

  1. Genomic architecture and inheritance of human ribosomal RNA gene clusters. (PMID: 18025267) Stults D.M. … Pierce A.J. (Genome Res. 2008) 67
  2. Human ribosomal RNA variants from a single individual and their expression in different tissues. (PMID: 8972871) Kuo B.A. … Sylvester J.E. (Nucleic Acids Res. 1996) 67
  3. Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones. (PMID: 3689320) Maden B.E. … Wakeman J.A. (Biochem. J. 1987) 67
  4. Evidence on the conformation of HeLa-cell 5.8S ribosomal ribonucleic acid from the reaction of specific cytidine residues with sodium bisulphite. (PMID: 100103) Kelly J.M. … Maden E.H. (Biochem. J. 1978) 67
  5. Sequence homologies in mammalian 5.8S ribosomal RNA. (PMID: 1252408) Nazar R.N. … Busch H. (Biochemistry 1976) 67

Products for RNA5-8S5 Gene

Sources for RNA5-8S5 Gene

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