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Aliases for RNA5-8S5 Gene

Subcategory (RNA class) for RNA5-8S5 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for RNA5-8S5 Gene

  • RNA, 5.8S Ribosomal 5 2 3
  • RNA, 5.8S Ribosomal 1 3
  • 5.8S Ribosomal RNA 3
  • RN5-8S1 3

External Ids for RNA5-8S5 Gene

Previous Symbols for RNA5-8S5 Gene

  • RN5-8S1

Summaries for RNA5-8S5 Gene

Entrez Gene Summary for RNA5-8S5 Gene

  • The sequences coding for ribosomal RNAs are present as rDNA repeating units, designated RNR1 through RNR5, in the p12 region of chromosomes 13, 14, 15, 21 and 22. A 45S rRNA which serves as the precursor for the 18S, 5.8S and 28S rRNA, is transcribed from each rDNA unit by RNA polymerase I. The number of rDNA repeating units varies between individuals and from chromosome to chromosome, although usually 30 to 40 repeats are found on each chromosome. These ribosomal repeating units are not currently annotated on the reference genome. This gene represents the portion of one rDNA repeat which encodes a 5.8S rRNA.[provided by RefSeq, Mar 2009]

GeneCards Summary for RNA5-8S5 Gene

RNA5-8S5 (RNA, 5.8S Ribosomal 5) is a RNA Gene, and belongs to non-coding RNA RNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5-8S5 Gene

Genomics for RNA5-8S5 Gene

Genomic Location for RNA5-8S5 Gene

Start:
112,025 bp from pter
End:
112,180 bp from pter
Size:
156 bases
Orientation:
Plus strand

Genomic View for RNA5-8S5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:

RefSeq DNA sequence for RNA5-8S5 Gene

No data available for Regulatory Elements for RNA5-8S5 Gene

Proteins for RNA5-8S5 Gene

Post-translational modifications for RNA5-8S5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5-8S5 Gene

Domains for RNA5-8S5 Gene

Gene Families for RNA5-8S5 Gene

HGNC:
  • RRNA :ncRNAs / Ribosomal RNA genes
genes like me logo Genes that share domains with RNA5-8S5: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for RNA5-8S5 Gene

Function for RNA5-8S5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNA5-8S5 Gene

Localization for RNA5-8S5 Gene

No data available for Gene Ontology (GO) - Cellular Components for RNA5-8S5 Gene

Pathways for RNA5-8S5 Gene

genes like me logo Genes that share pathways with RNA5-8S5: view

Pathways by source for RNA5-8S5 Gene

1 GeneGo (Thomson Reuters Life Sciences Research) pathway for RNA5-8S5 Gene

Interacting Proteins for RNA5-8S5 Gene

Gene Ontology (GO) - Biological Process for RNA5-8S5 Gene

None

Transcripts for RNA5-8S5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5-8S5 Gene

No ASD Table

Relevant External Links for RNA5-8S5 Gene

GeneLoc Exon Structure for
RNA5-8S5
ECgene alternative splicing isoforms for
RNA5-8S5

No data available for mRNA/cDNA for RNA5-8S5 Gene

Expression for RNA5-8S5 Gene

No Expression Related Data Available

Orthologs for RNA5-8S5 Gene

No data available for Orthologs and Evolution for RNA5-8S5 Gene

Paralogs for RNA5-8S5 Gene

No data available for Paralogs for RNA5-8S5 Gene

Variants for RNA5-8S5 Gene

Relevant External Links for RNA5-8S5 Gene

HapMap Linkage Disequilibrium report
RNA5-8S5

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RNA5-8S5 Gene

Disorders for RNA5-8S5 Gene

No disorders were found for RNA5-8S5 Gene.

No data available for UniProtKB/Swiss-Prot for RNA5-8S5 Gene

Publications for RNA5-8S5 Gene

  1. Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones. (PMID: 3689320) Maden B.E. … Wakeman J.A. (Biochem. J. 1987) 3
  2. Human ribosomal RNA variants from a single individual and their expression in different tissues. (PMID: 8972871) Kuo B.A. … Sylvester J.E. (Nucleic Acids Res. 1996) 3

Products for RNA5-8S5 Gene

Sources for RNA5-8S5 Gene

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