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Aliases for RNA5-8S3 Gene

Subcategory (RNA class) for RNA5-8S3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for RNA5-8S3 Gene

  • RNA, 5.8S Ribosomal 3 2 3
  • 5.8S RRNA 3 2

External Ids for RNA5-8S3 Gene

Previous GeneCards Identifiers for RNA5-8S3 Gene

  • GC00U934067

Summaries for RNA5-8S3 Gene

Entrez Gene Summary for RNA5-8S3 Gene

  • 45S ribosomal DNA (rDNA) arrays, or clusters, are present on human chromosomes 13, 14, 15, 21 and 22, designated RNR1 through RNR5, respectively. Each cluster consists of multiple 45S rDNA repeat units that vary in number among individuals and chromosomes, with total diploid copy number estimates ranging from 60 to >800 repeat units in a human genome. The 45S rDNA repeat unit encodes a 45S rRNA precursor, transcribed by RNA polymerase I, which is processed to form the 18S, 5.8S and 28S rRNAs. Gene and RefSeq, in collaboration with HGNC, currently describe one 45S rDNA cluster, and one set of 45S precursor and product rRNAs, for each of the five human chromosomes to which these loci are localized. This gene is a representative copy of the 5.8S ribosomal RNA on chromosome 15. [provided by RefSeq, Feb 2017]

GeneCards Summary for RNA5-8S3 Gene

RNA5-8S3 (RNA, 5.8S Ribosomal 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5-8S3 Gene

Genomics for RNA5-8S3 Gene

Genomic Location for RNA5-8S3 Gene

Chromosome:
15
Orientation:
Unknown strand

Genomic View for RNA5-8S3 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements and RefSeq DNA sequence for RNA5-8S3 Gene

Proteins for RNA5-8S3 Gene

Post-translational modifications for RNA5-8S3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5-8S3 Gene

Domains & Families for RNA5-8S3 Gene

Gene Families for RNA5-8S3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNA5-8S3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5-8S3 Gene

Function for RNA5-8S3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5-8S3 Gene

Localization for RNA5-8S3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA5-8S3 Gene

Pathways & Interactions for RNA5-8S3 Gene

SuperPathways for RNA5-8S3 Gene

No Data Available

Interacting Proteins for RNA5-8S3 Gene

Gene Ontology (GO) - Biological Process for RNA5-8S3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5-8S3 Gene

Drugs & Compounds for RNA5-8S3 Gene

No Compound Related Data Available

Transcripts for RNA5-8S3 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5-8S3 Gene

No ASD Table

Relevant External Links for RNA5-8S3 Gene

ECgene alternative splicing isoforms for
RNA5-8S3

No data available for mRNA/cDNA for RNA5-8S3 Gene

Expression for RNA5-8S3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5-8S3 Gene

Orthologs for RNA5-8S3 Gene

No data available for Orthologs and Evolution for RNA5-8S3 Gene

Paralogs for RNA5-8S3 Gene

No data available for Paralogs for RNA5-8S3 Gene

Variants for RNA5-8S3 Gene

Relevant External Links for RNA5-8S3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5-8S3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5-8S3 Gene

Disorders for RNA5-8S3 Gene

No disorders were found for RNA5-8S3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5-8S3 Gene

Publications for RNA5-8S3 Gene

  1. The Epigenetic Pathways to Ribosomal DNA Silencing. (PMID: 27250769) Srivastava R. … Ahn S.H. (Microbiol. Mol. Biol. Rev. 2016) 3 64
  2. Nucleolar organizer regions: genomic 'dark matter' requiring illumination. (PMID: 27474438) McStay B. (Genes Dev. 2016) 3 64
  3. A Portrait of Ribosomal DNA Contacts with Hi-C Reveals 5S and 45S rDNA Anchoring Points in the Folded Human Genome. (PMID: 27797956) Yu S. … Lemos B. (Genome Biol Evol 2016) 3 64
  4. An overview of pre-ribosomal RNA processing in eukaryotes. (PMID: 25346433) Henras A.K. … Gleizes P.E. (Wiley Interdiscip Rev RNA 2015) 3 64
  5. Concerted copy number variation balances ribosomal DNA dosage in human and mouse genomes. (PMID: 25583482) Gibbons J.G. … Lemos B. (Proc. Natl. Acad. Sci. U.S.A. 2015) 3 64

Products for RNA5-8S3 Gene

Sources for RNA5-8S3 Gene

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