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Aliases for RNA18SN2 Gene

Subcategory (RNA class) for RNA18SN2 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for RNA18SN2 Gene

  • RNA, 18S Ribosomal N2 2 3

External Ids for RNA18SN2 Gene

Summaries for RNA18SN2 Gene

Entrez Gene Summary for RNA18SN2 Gene

  • 45S ribosomal DNA (rDNA) arrays, or clusters, are present on human chromosomes 13, 14, 15, 21 and 22, designated RNR1 through RNR5, respectively. Each cluster consists of multiple 45S rDNA repeat units that vary in number among individuals and chromosomes, with total diploid copy number estimates ranging from 60 to >800 repeat units in a human genome. The 45S rDNA repeat unit encodes a 45S rRNA precursor, transcribed by RNA polymerase I, which is processed to form the 18S, 5.8S and 28S rRNAs. This gene represents a copy of the 18S ribosomal RNA on chromosome 21. [provided by RefSeq, Mar 2017]

GeneCards Summary for RNA18SN2 Gene

RNA18SN2 (RNA, 18S Ribosomal N2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RNA18SN2 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA18SN2 Gene

Genomics for RNA18SN2 Gene

Genomic Location for RNA18SN2 Gene

Chromosome:
21
Orientation:
Unknown strand

Genomic View for RNA18SN2 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements and RefSeq DNA sequence for RNA18SN2 Gene

Proteins for RNA18SN2 Gene

Post-translational modifications for RNA18SN2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA18SN2 Gene

Domains & Families for RNA18SN2 Gene

Gene Families for RNA18SN2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNA18SN2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA18SN2 Gene

Function for RNA18SN2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA18SN2 Gene

Localization for RNA18SN2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA18SN2 Gene

Pathways & Interactions for RNA18SN2 Gene

SuperPathways for RNA18SN2 Gene

No Data Available

Interacting Proteins for RNA18SN2 Gene

Gene Ontology (GO) - Biological Process for RNA18SN2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA18SN2 Gene

Drugs & Compounds for RNA18SN2 Gene

No Compound Related Data Available

Transcripts for RNA18SN2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNA18SN2 Gene

No ASD Table

Relevant External Links for RNA18SN2 Gene

ECgene alternative splicing isoforms for
RNA18SN2

No data available for mRNA/cDNA for RNA18SN2 Gene

Expression for RNA18SN2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA18SN2 Gene

Orthologs for RNA18SN2 Gene

No data available for Orthologs and Evolution for RNA18SN2 Gene

Paralogs for RNA18SN2 Gene

No data available for Paralogs for RNA18SN2 Gene

Variants for RNA18SN2 Gene

Relevant External Links for RNA18SN2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA18SN2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA18SN2 Gene

Disorders for RNA18SN2 Gene

Relevant External Links for RNA18SN2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RNA18SN2

No disorders were found for RNA18SN2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNA18SN2 Gene

Publications for RNA18SN2 Gene

  1. A Portrait of Ribosomal DNA Contacts with Hi-C Reveals 5S and 45S rDNA Anchoring Points in the Folded Human Genome. (PMID: 27797956) Yu S … Lemos B (Genome biology and evolution 2016) 3 60
  2. Nucleolar organizer regions: genomic 'dark matter' requiring illumination. (PMID: 27474438) McStay B (Genes & development 2016) 3 60
  3. The Epigenetic Pathways to Ribosomal DNA Silencing. (PMID: 27250769) Srivastava R … Ahn SH (Microbiology and molecular biology reviews : MMBR 2016) 3 60
  4. An overview of pre-ribosomal RNA processing in eukaryotes. (PMID: 25346433) Henras AK … Gleizes PE (Wiley interdisciplinary reviews. RNA 2015) 3 60
  5. Concerted copy number variation balances ribosomal DNA dosage in human and mouse genomes. (PMID: 25583482) Gibbons JG … Lemos B (Proceedings of the National Academy of Sciences of the United States of America 2015) 3 60

Products for RNA18SN2 Gene

Sources for RNA18SN2 Gene

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