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Aliases for RNA18S5 Gene

Subcategory (RNA class) for RNA18S5 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for RNA18S5 Gene

  • RNA, 18S Ribosomal 5 2 3
  • 18S Ribosomal RNA 3
  • RN18S1 3

External Ids for RNA18S5 Gene

Previous HGNC Symbols for RNA18S5 Gene

  • RN18S1

Previous GeneCards Identifiers for RNA18S5 Gene

  • GC00P6C0110
  • GC0YM010038
  • GC0YM010199
  • GC00P000560

Summaries for RNA18S5 Gene

Entrez Gene Summary for RNA18S5 Gene

  • The sequences coding for ribosomal RNAs are present as rDNA repeating units, designated RNR1 through RNR5, in the p12 region of chromosomes 13, 14, 15, 21 and 22. A 45S rRNA which serves as the precursor for the 18S, 5.8S and 28S rRNA, is transcribed from each rDNA unit by RNA polymerase I. The number of rDNA repeating units varies between individuals and from chromosome to chromosome, although usually 30 to 40 repeats are found on each chromosome. These ribosomal repeating units are not currently annotated on the reference genome. This gene represents the portion of one rDNA repeat which encodes an 18S rRNA.[provided by RefSeq, Mar 2009]

GeneCards Summary for RNA18S5 Gene

RNA18S5 (RNA, 18S Ribosomal 5) is an RNA Gene, and is affiliated with the non-coding RNA class. Among its related pathways are Viral mRNA Translation.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA18S5 Gene

Genomics for RNA18S5 Gene

Genomic Location for RNA18S5 Gene

No location information available

Genomic View for RNA18S5 Gene


Cytogenetic band:

RefSeq DNA sequence for RNA18S5 Gene

No data available for Regulatory Elements for RNA18S5 Gene

Proteins for RNA18S5 Gene

Post-translational modifications for RNA18S5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA18S5 Gene

Domains & Families for RNA18S5 Gene

Gene Families for RNA18S5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNA18S5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA18S5 Gene

Function for RNA18S5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA18S5 Gene

Localization for RNA18S5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNA18S5 Gene

Pathways & Interactions for RNA18S5 Gene

genes like me logo Genes that share pathways with RNA18S5: view

Pathways by source for RNA18S5 Gene

1 GeneGo (Thomson Reuters) pathway for RNA18S5 Gene

Interacting Proteins for RNA18S5 Gene

Gene Ontology (GO) - Biological Process for RNA18S5 Gene

None

No data available for SIGNOR curated interactions for RNA18S5 Gene

Drugs & Compounds for RNA18S5 Gene

No Compound Related Data Available

Transcripts for RNA18S5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNA18S5 Gene

No ASD Table

Relevant External Links for RNA18S5 Gene

GeneLoc Exon Structure for
RNA18S5
ECgene alternative splicing isoforms for
RNA18S5

No data available for mRNA/cDNA for RNA18S5 Gene

Expression for RNA18S5 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNA18S5 Gene

Orthologs for RNA18S5 Gene

No data available for Orthologs and Evolution for RNA18S5 Gene

Paralogs for RNA18S5 Gene

No data available for Paralogs for RNA18S5 Gene

Variants for RNA18S5 Gene

Relevant External Links for RNA18S5 Gene

HapMap Linkage Disequilibrium report
RNA18S5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA18S5 Gene

Disorders for RNA18S5 Gene

No disorders were found for RNA18S5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA18S5 Gene

Publications for RNA18S5 Gene

  1. Human ribosomal RNA variants from a single individual and their expression in different tissues. (PMID: 8972871) Kuo B.A. … Sylvester J.E. (Nucleic Acids Res. 1996) 2 3 67
  2. The tumor suppressive role of eIF3f and its function in translation inhibition and rRNA degradation. (PMID: 22457825) Wen F. … Shi J. (PLoS ONE 2012) 3
  3. Interactome study suggests multiple cellular functions of hepatoma-derived growth factor (HDGF). (PMID: 21907836) Zhao J. … Yang P. (J Proteomics 2011) 3
  4. Defects in 18 S or 28 S rRNA processing activate the p53 pathway. (PMID: 20056613) HAPlzel M. … Eick D. (J. Biol. Chem. 2010) 3
  5. Genomic architecture and inheritance of human ribosomal RNA gene clusters. (PMID: 18025267) Stults D.M. … Pierce A.J. (Genome Res. 2008) 3

Products for RNA18S5 Gene

Sources for RNA18S5 Gene

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