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Aliases for RN7SL8P Gene

Subcategory (RNA class) for RN7SL8P Gene

lncRNA

Aliases for RN7SL8P Gene

  • RNA, 7SL, Cytoplasmic 8, Pseudogene 2 3 5
  • RNA, 7SL, Cytoplasmic 433, Pseudogene 2 3
  • RNA, 7SL, Cytoplasmic, Pseudogene 5 2 3
  • RN7SL433P 3
  • RN7SLP5 3
  • 7L63 3

External Ids for RN7SL8P Gene

ORGUL Members for RN7SL8P Gene

Previous HGNC Symbols for RN7SL8P Gene

  • RN7SLP5
  • RN7SL433P

Previous GeneCards Identifiers for RN7SL8P Gene

  • GC07P104555

Summaries for RN7SL8P Gene

GeneCards Summary for RN7SL8P Gene

RN7SL8P (RNA, 7SL, Cytoplasmic 8, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL8P Gene

Genomics for RN7SL8P Gene

Regulatory Elements for RN7SL8P Gene

Enhancers for RN7SL8P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G104882 1.4 Ensembl ENCODE 0.3 -27.7 -27665 2.7 HDGF PKNOX1 MLX CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A FEZF1 LINC01004 ORC5 KMT2E-AS1 RN7SL8P GC07M104825
GH07G104897 0.9 ENCODE 0.4 -14.6 -14645 0.2 TBP PKNOX1 TBL1XR1 SIN3A BMI1 FEZF1 RFX5 CBX5 ZSCAN5C RELB RN7SL8P GC07M104825
GH07G104906 0.5 ENCODE 0.7 -5.0 -4950 1.6 RING1 CBX8 SMARCA4 RNF2 BMI1 LINC01004 ORC5 RN7SL8P GC07M104825
GH07G104900 0.7 ENCODE 0.4 -11.2 -11165 0.2 SOX5 SOX13 GATAD2A HMG20B RFX1 FOXA2 TEAD1 FOXA3 CEBPG HMG20A RN7SL8P GC07M104825
GH07G104894 0.7 ENCODE 0.4 -16.6 -16550 2.4 PKNOX1 WRNIP1 RELA CBX5 EED RELB IKZF2 MTA2 HLF NRF1 RN7SL8P GC07M104825
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL8P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL8P Gene

Chromosome:
7
Start:
104,911,873 bp from pter
End:
104,912,193 bp from pter
Size:
321 bases
Orientation:
Plus strand

Genomic View for RN7SL8P Gene

Genes around RN7SL8P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL8P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL8P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL8P Gene

Proteins for RN7SL8P Gene

Post-translational modifications for RN7SL8P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL8P Gene

Domains & Families for RN7SL8P Gene

Gene Families for RN7SL8P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL8P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL8P Gene

Function for RN7SL8P Gene

Phenotypes for RN7SL8P Gene

GenomeRNAi human phenotypes for RN7SL8P:
genes like me logo Genes that share phenotypes with RN7SL8P: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL8P Gene

Localization for RN7SL8P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL8P Gene

Pathways & Interactions for RN7SL8P Gene

SuperPathways for RN7SL8P Gene

No Data Available

Interacting Proteins for RN7SL8P Gene

Gene Ontology (GO) - Biological Process for RN7SL8P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL8P Gene

Drugs & Compounds for RN7SL8P Gene

No Compound Related Data Available

Transcripts for RN7SL8P Gene

mRNA/cDNA for RN7SL8P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL8P Gene

No ASD Table

Relevant External Links for RN7SL8P Gene

GeneLoc Exon Structure for
RN7SL8P
ECgene alternative splicing isoforms for
RN7SL8P

Expression for RN7SL8P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL8P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL8P Gene

This gene is overexpressed in Kidney - Cortex (x24.1), Small Intestine - Terminal Ileum (x6.1), Pancreas (x5.5), Lung (x5.1), and Colon - Transverse (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL8P Gene:

RN7SL8P
genes like me logo Genes that share expression patterns with RN7SL8P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL8P Gene

Orthologs for RN7SL8P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RN7SL8P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 92 (a)
OneToOne
cow
(Bos Taurus)
Mammalia Metazoa_SRP 35
  • 68 (a)
OneToOne
Species where no ortholog for RN7SL8P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL8P Gene

ENSEMBL:
Gene Tree for RN7SL8P (if available)
TreeFam:
Gene Tree for RN7SL8P (if available)

Paralogs for RN7SL8P Gene

No data available for Paralogs for RN7SL8P Gene

Variants for RN7SL8P Gene

Relevant External Links for RN7SL8P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL8P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL8P Gene

Disorders for RN7SL8P Gene

Relevant External Links for RN7SL8P

Genetic Association Database (GAD)
RN7SL8P

No disorders were found for RN7SL8P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RN7SL8P Gene

Publications for RN7SL8P Gene

  1. Human genes and pseudogenes for the 7SL RNA component of signal recognition particle. (PMID: 6084597) Ullu E. … Weiner A.M. (EMBO J. 1984) 2 3 64

Products for RN7SL8P Gene

Sources for RN7SL8P Gene

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