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Aliases for RN7SL88P Gene

Subcategory (RNA class) for RN7SL88P Gene

SRP

Aliases for RN7SL88P Gene

  • RNA, 7SL, Cytoplasmic 88, Pseudogene 2 3 5

External Ids for RN7SL88P Gene

ORGUL Members for RN7SL88P Gene

Previous GeneCards Identifiers for RN7SL88P Gene

  • GC12M096500
  • GC00U936218

Summaries for RN7SL88P Gene

GeneCards Summary for RN7SL88P Gene

RN7SL88P (RNA, 7SL, Cytoplasmic 88, Pseudogene) is a Pseudogene, and is affiliated with the SRP RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL88P Gene

Genomics for RN7SL88P Gene

Regulatory Elements for RN7SL88P Gene

Enhancers for RN7SL88P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F096099 1 Ensembl ENCODE 0.8 +2.0 2049 1.2 SMARCA4 TEAD1 FOXA3 CEBPA GC12M096103 LOC105369923 RN7SL88P
GH12F096102 0.6 Ensembl ENCODE 0.8 -0.9 -879 1.0 MTA2 GC12M096103 RN7SL88P GC12M096123
GH12F096107 1.1 FANTOM5 Ensembl ENCODE 0.4 -6.1 -6096 2.1 HDGF YBX1 ZNF366 ETV6 ZNF680 MIER1 ZBTB2 ZBTB11 JUNB ELF1 NEDD1 RN7SL88P GC12M096103 GC12M096123
GH12F096109 0.2 Ensembl 0.4 -8.0 -7952 0.8 NFYB LOC102723340 RN7SL88P GC12M096103 GC12M096123
GH12F096112 0.2 ENCODE 0.4 -10.7 -10664 1.2 SOX13 ELF3 SOX5 TFAP4 FOXA3 RARA HNF1A SMARCA4 TCF7 BCL6 LTA4H GC12M096103 RN7SL88P GC12M096123
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RN7SL88P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL88P Gene

Chromosome:
12
Start:
96,101,951 bp from pter
End:
96,102,249 bp from pter
Size:
299 bases
Orientation:
Minus strand

Genomic View for RN7SL88P Gene

Genes around RN7SL88P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL88P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL88P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL88P Gene

Proteins for RN7SL88P Gene

Post-translational modifications for RN7SL88P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL88P Gene

Domains & Families for RN7SL88P Gene

Gene Families for RN7SL88P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL88P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL88P Gene

Function for RN7SL88P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL88P Gene

Localization for RN7SL88P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL88P Gene

Pathways & Interactions for RN7SL88P Gene

SuperPathways for RN7SL88P Gene

No Data Available

Interacting Proteins for RN7SL88P Gene

Gene Ontology (GO) - Biological Process for RN7SL88P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL88P Gene

Transcripts for RN7SL88P Gene

mRNA/cDNA for RN7SL88P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL88P Gene

No ASD Table

Relevant External Links for RN7SL88P Gene

GeneLoc Exon Structure for
RN7SL88P
ECgene alternative splicing isoforms for
RN7SL88P

Expression for RN7SL88P Gene

mRNA expression in normal human tissues for RN7SL88P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL88P Gene:

RN7SL88P
genes like me logo Genes that share expression patterns with RN7SL88P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SL88P Gene

Orthologs for RN7SL88P Gene

Evolution for RN7SL88P Gene

ENSEMBL:
Gene Tree for RN7SL88P (if available)
TreeFam:
Gene Tree for RN7SL88P (if available)

No data available for Orthologs for RN7SL88P Gene

Paralogs for RN7SL88P Gene

No data available for Paralogs for RN7SL88P Gene

Variants for RN7SL88P Gene

Relevant External Links for RN7SL88P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL88P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL88P Gene

Disorders for RN7SL88P Gene

No disorders were found for RN7SL88P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL88P Gene

Publications for RN7SL88P Gene

No publications were found for RN7SL88P Gene.

Products for RN7SL88P Gene

Sources for RN7SL88P Gene

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