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Aliases for RN7SL856P Gene

Subcategory (RNA class) for RN7SL856P Gene

lncRNA

Aliases for RN7SL856P Gene

  • RNA, 7SL, Cytoplasmic 856, Pseudogene 2 3 5
  • Tmp_locus_48 3

External Ids for RN7SL856P Gene

ORGUL Members for RN7SL856P Gene

Previous GeneCards Identifiers for RN7SL856P Gene

  • GC02P025284
  • GC00U936370

Summaries for RN7SL856P Gene

GeneCards Summary for RN7SL856P Gene

RN7SL856P (RNA, 7SL, Cytoplasmic 856, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL856P Gene

Genomics for RN7SL856P Gene

Regulatory Elements for RN7SL856P Gene

Enhancers for RN7SL856P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G025054 0.9 dbSUPER 0.7 -1.9 -1896 3.1 HDAC1 HDGF PKNOX1 BMI1 RAD21 RARA TCF12 ZNF143 ETV6 RELB ADCY3 POMC DNAJC27-AS1 DNAJC27 ENSG00000202479 RPS13P5 RN7SL856P EFR3B
GH02G025041 1.2 ENCODE dbSUPER 0.4 -15.5 -15496 2.8 SIN3A FEZF1 GLIS2 FOS ZNF263 SP3 SP5 MXD4 REST GLIS1 ADCY3 EFR3B RN7SL856P
GH02G025077 1.5 Ensembl ENCODE dbSUPER 0.3 +20.5 20527 1.3 PKNOX1 SIN3A FEZF1 ZNF2 GTF3C2 GLIS2 GATA2 FOS SP3 JUNB ADCY3 POMC LINC01381 SUCLA2P3 RN7SL856P
GH02G025061 0.8 dbSUPER 0.4 +5.5 5497 3.4 PKNOX1 TBL1XR1 ASH2L ZNF48 ARID3A CBX5 POLR2A EED NR2F6 IKZF2 ADCY3 EFR3B POMC ENSG00000202479 RPS13P5 DNAJC27-AS1 DNAJC27 NCOA1 RN7SL856P SUCLA2P3
GH02G025067 0.6 dbSUPER 0.4 +10.2 10214 1.0 NFIB ZNF48 ZFHX2 NFIC JUND GATA2 PRDM10 EGR2 ADCY3 EFR3B SUCLA2P3 RN7SL856P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL856P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL856P Gene

Chromosome:
2
Start:
25,058,032 bp from pter
End:
25,058,329 bp from pter
Size:
298 bases
Orientation:
Plus strand

Genomic View for RN7SL856P Gene

Genes around RN7SL856P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL856P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL856P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL856P Gene

Proteins for RN7SL856P Gene

Post-translational modifications for RN7SL856P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL856P Gene

Domains & Families for RN7SL856P Gene

Gene Families for RN7SL856P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL856P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL856P Gene

Function for RN7SL856P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL856P Gene

Localization for RN7SL856P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL856P Gene

Pathways & Interactions for RN7SL856P Gene

SuperPathways for RN7SL856P Gene

No Data Available

Interacting Proteins for RN7SL856P Gene

Gene Ontology (GO) - Biological Process for RN7SL856P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL856P Gene

Drugs & Compounds for RN7SL856P Gene

No Compound Related Data Available

Transcripts for RN7SL856P Gene

mRNA/cDNA for RN7SL856P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL856P Gene

No ASD Table

Relevant External Links for RN7SL856P Gene

GeneLoc Exon Structure for
RN7SL856P
ECgene alternative splicing isoforms for
RN7SL856P

Expression for RN7SL856P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL856P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL856P Gene

This gene is overexpressed in Brain - Cerebellum (x14.5) and Brain - Cerebellar Hemisphere (x9.0).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL856P Gene:

RN7SL856P
genes like me logo Genes that share expression patterns with RN7SL856P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL856P Gene

Orthologs for RN7SL856P Gene

Evolution for RN7SL856P Gene

ENSEMBL:
Gene Tree for RN7SL856P (if available)
TreeFam:
Gene Tree for RN7SL856P (if available)

No data available for Orthologs for RN7SL856P Gene

Paralogs for RN7SL856P Gene

No data available for Paralogs for RN7SL856P Gene

Variants for RN7SL856P Gene

Relevant External Links for RN7SL856P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL856P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL856P Gene

Disorders for RN7SL856P Gene

No disorders were found for RN7SL856P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL856P Gene

Publications for RN7SL856P Gene

No publications were found for RN7SL856P Gene.

Products for RN7SL856P Gene

Sources for RN7SL856P Gene

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