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Aliases for RN7SL840P Gene

Aliases for RN7SL840P Gene

  • RNA, 7SL, Cytoplasmic 840, Pseudogene 2 3 5

External Ids for RN7SL840P Gene

Previous GeneCards Identifiers for RN7SL840P Gene

  • GC00U934271

Summaries for RN7SL840P Gene

GeneCards Summary for RN7SL840P Gene

RN7SL840P (RNA, 7SL, Cytoplasmic 840, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL840P Gene

Genomics for RN7SL840P Gene

Regulatory Elements for RN7SL840P Gene

Enhancers for RN7SL840P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G072562 1.4 FANTOM5 Ensembl ENCODE 0.4 -18.9 -18911 2.6 TSC22D4 MAX CEBPG ARID3A ZNF366 EED ETV6 RELB IKZF2 CREM C10orf105 DNAJB12 MCU CFAP70 DDIT4 ENSG00000230609 RN7SL840P
GH10G072567 1.2 FANTOM5 Ensembl ENCODE 0.4 -15.2 -15192 1.2 ZNF263 CTCF MAFG TRIM22 REST RAD21 MAFF JUND ZNF316 SMC3 DNAJB12 MCU DDIT4 ENSG00000230609 RN7SL840P
GH10G072624 1.1 ENCODE 0.3 +42.8 42844 2.6 HNRNPUL1 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B ECD DNAJC9 DNAJB12 RPL17P50 CFAP70 MICU1 RN7SL840P
GH10G072593 0.7 Ensembl 0.4 +11.2 11198 0.8 BCOR SOX5 SOX13 GATAD2A ZNF280D TFE3 FOXA2 SAP130 ZMYM3 CEBPB DNAJB12 OIT3 ENSG00000226163 RN7SL840P MICU1
GH10G072611 0.9 Ensembl 0.3 +29.4 29399 0.8 PKNOX1 INSM2 FEZF1 RAD21 ZNF121 ZNF366 ZSCAN5C ZNF263 ZNF362 OVOL3 MCU MICU1 RN7SL840P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL840P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL840P Gene

Chromosome:
10
Start:
72,582,803 bp from pter
End:
72,583,086 bp from pter
Size:
284 bases
Orientation:
Plus strand

Genomic View for RN7SL840P Gene

Genes around RN7SL840P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL840P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL840P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL840P Gene

Proteins for RN7SL840P Gene

Post-translational modifications for RN7SL840P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL840P Gene

Domains & Families for RN7SL840P Gene

Gene Families for RN7SL840P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL840P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL840P Gene

Function for RN7SL840P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL840P Gene

Localization for RN7SL840P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL840P Gene

Pathways & Interactions for RN7SL840P Gene

SuperPathways for RN7SL840P Gene

No Data Available

Interacting Proteins for RN7SL840P Gene

Gene Ontology (GO) - Biological Process for RN7SL840P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL840P Gene

Drugs & Compounds for RN7SL840P Gene

No Compound Related Data Available

Transcripts for RN7SL840P Gene

mRNA/cDNA for RN7SL840P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL840P Gene

No ASD Table

Relevant External Links for RN7SL840P Gene

GeneLoc Exon Structure for
RN7SL840P
ECgene alternative splicing isoforms for
RN7SL840P

Expression for RN7SL840P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL840P Gene:

RN7SL840P
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL840P Gene

Orthologs for RN7SL840P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL840P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 100 (a)
OneToOne
Species where no ortholog for RN7SL840P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL840P Gene

ENSEMBL:
Gene Tree for RN7SL840P (if available)
TreeFam:
Gene Tree for RN7SL840P (if available)

Paralogs for RN7SL840P Gene

No data available for Paralogs for RN7SL840P Gene

Variants for RN7SL840P Gene

Relevant External Links for RN7SL840P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL840P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL840P Gene

Disorders for RN7SL840P Gene

No disorders were found for RN7SL840P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL840P Gene

Publications for RN7SL840P Gene

No publications were found for RN7SL840P Gene.

Products for RN7SL840P Gene

Sources for RN7SL840P Gene

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