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Aliases for RN7SL684P Gene

Subcategory (RNA class) for RN7SL684P Gene

antisense

Aliases for RN7SL684P Gene

  • RNA, 7SL, Cytoplasmic 684, Pseudogene 2 3 5

External Ids for RN7SL684P Gene

ORGUL Members for RN7SL684P Gene

Previous GeneCards Identifiers for RN7SL684P Gene

  • GC05M175977

Summaries for RN7SL684P Gene

GeneCards Summary for RN7SL684P Gene

RN7SL684P (RNA, 7SL, Cytoplasmic 684, Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RN7SL684P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL684P Gene

Genomics for RN7SL684P Gene

GeneHancer (GH) Regulatory Elements for RN7SL684P Gene

Promoters and enhancers for RN7SL684P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I176539 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.9 1941 11.8 HDGF FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 IRF4 CDHR2 RN7SL684P FAF2 ENSG00000250909 ENSG00000251414 NSD1 ZNF346-IT1 RNF44 UIMC1 CLTB
GH05I176410 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 10.9 +132.8 132810 8.8 PKNOX1 ARNT ARID4B NEUROD1 SIN3A DMAP1 ZNF2 ZNF207 ZNF143 FOS CLTB ENSG00000251414 FAF2 HIGD2A ARL10 NOP16 UIMC1 ENSG00000250909 MIR1271 KIAA1191
GH05I176436 Enhancer 0.8 Ensembl ENCODE 11 +110.9 110861 1.1 SOX5 SOX13 GATAD2A PKNOX1 SOX6 CEBPG ZNF335 GATA3 CEBPA FOS CDHR2 RN7SL684P ENSG00000280139 CLTB
GH05I176423 Enhancer 0.7 ENCODE dbSUPER 11.2 +121.7 121686 5.6 GLIS1 VEZF1 ZSCAN29 ELF1 SETDB1 FAF2 CDHR2 RN7SL684P MIR1271 ARL10 KIAA1191 GPRIN1 ENSG00000251414 HIGD2A CLTB
GH05I176481 Enhancer 0.7 ENCODE 10.9 +65.8 65795 0.8 HDAC1 KLF1 SAP130 BACH1 ZNF316 NFE2 PRDM10 MAFK NFE2L2 ZNF639 CLTB FAF2 NOP16 HIGD2A CDHR2 RN7SL684P MIR1271 KIAA1191 ARL10 PIR40188
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SL684P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL684P Gene

Genomic Locations for RN7SL684P Gene
chr5:176,547,433-176,547,726
(GRCh38/hg38)
Size:
294 bases
Orientation:
Minus strand
chr5:175,974,436-175,974,727
(GRCh37/hg19)

Genomic View for RN7SL684P Gene

Genes around RN7SL684P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL684P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL684P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL684P Gene

Proteins for RN7SL684P Gene

Post-translational modifications for RN7SL684P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL684P Gene

Domains & Families for RN7SL684P Gene

Gene Families for RN7SL684P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL684P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL684P Gene

Function for RN7SL684P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL684P Gene

Localization for RN7SL684P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL684P Gene

Pathways & Interactions for RN7SL684P Gene

SuperPathways for RN7SL684P Gene

No Data Available

Interacting Proteins for RN7SL684P Gene

Gene Ontology (GO) - Biological Process for RN7SL684P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL684P Gene

Drugs & Compounds for RN7SL684P Gene

No Compound Related Data Available

Transcripts for RN7SL684P Gene

mRNA/cDNA for RN7SL684P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL684P Gene

No ASD Table

Relevant External Links for RN7SL684P Gene

GeneLoc Exon Structure for
RN7SL684P
ECgene alternative splicing isoforms for
RN7SL684P

Expression for RN7SL684P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL684P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL684P Gene

This gene is overexpressed in Whole Blood (x20.8) and Colon - Transverse (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL684P Gene:

RN7SL684P
genes like me logo Genes that share expression patterns with RN7SL684P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL684P Gene

Orthologs for RN7SL684P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL684P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 96 (a)
OneToOne
Species where no ortholog for RN7SL684P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL684P Gene

ENSEMBL:
Gene Tree for RN7SL684P (if available)
TreeFam:
Gene Tree for RN7SL684P (if available)

Paralogs for RN7SL684P Gene

No data available for Paralogs for RN7SL684P Gene

Variants for RN7SL684P Gene

Additional Variant Information for RN7SL684P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL684P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL684P Gene

Disorders for RN7SL684P Gene

No disorders were found for RN7SL684P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL684P Gene

Publications for RN7SL684P Gene

No publications were found for RN7SL684P Gene.

Products for RN7SL684P Gene

Sources for RN7SL684P Gene

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