Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RN7SL652P Gene

Subcategory (RNA class) for RN7SL652P Gene

lncRNA

Aliases for RN7SL652P Gene

  • RNA, 7SL, Cytoplasmic 652, Pseudogene 2 3 5

External Ids for RN7SL652P Gene

ORGUL Members for RN7SL652P Gene

Previous GeneCards Identifiers for RN7SL652P Gene

  • GC11M048815
  • GC11M049927
  • GC11M047790
  • GC11M047954
  • GC11M050828
  • GC11M051642
  • GC11M052304

Summaries for RN7SL652P Gene

GeneCards Summary for RN7SL652P Gene

RN7SL652P (RNA, 7SL, Cytoplasmic 652, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL652P Gene

Genomics for RN7SL652P Gene

Regulatory Elements for RN7SL652P Gene

Enhancers for RN7SL652P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G047550 1.7 FANTOM5 ENCODE dbSUPER 0.4 +5.6 5647 3.8 HDGF PKNOX1 ZFP64 WRNIP1 ARID4B SIN3A DMAP1 FEZF1 ZNF2 YY1 C1QTNF4 C11orf49 RNU5E-10P ENSG00000231880 KBTBD4 FNBP4 CELF1 PTPRJ NR1H3 SPI1
GH11G047537 1.4 Ensembl ENCODE dbSUPER 0.4 +18.4 18441 4.4 PKNOX1 INSM2 KLF17 SIN3A FEZF1 RAD21 ZNF2 GATA2 ZNF366 SCRT2 C1QTNF4 CELF1 NDUFS3 PTPMT1 KBTBD4 ENSG00000231880 RNU5E-10P MADD MTCH2 FNBP4
GH11G047543 1.1 dbSUPER 0.4 +13.8 13820 2.0 HDGF FOXA2 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 SP3 C1QTNF4 FNBP4 NUP160 ZNF408 ENSG00000270060 ENSG00000200090 DDB2 KBTBD4 PSMC3 PACSIN3
GH11G047521 1.4 Ensembl ENCODE dbSUPER 0.3 +33.6 33618 4.8 HDGF PKNOX1 SIN3A FEZF1 YY1 FOS DEK ZNF263 JUNB ZNF579 C1QTNF4 CELF1 NDUFS3 PTPMT1 FAM180B RNU5E-10P ENSG00000231880 C11orf49 ENSG00000270072 RN7SL652P
GH11G047547 0.9 Ensembl dbSUPER 0.4 +9.9 9933 1.4 HLF CEBPB CEBPG EP300 RAD21 YY1 ATF3 POLR3A CEBPA HNF4A KBTBD4 PTPRJ RN7SL652P ENSG00000270072
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL652P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL652P Gene

Chromosome:
11
Start:
47,557,534 bp from pter
End:
47,557,833 bp from pter
Size:
300 bases
Orientation:
Minus strand

Genomic View for RN7SL652P Gene

Genes around RN7SL652P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL652P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL652P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL652P Gene

Proteins for RN7SL652P Gene

Post-translational modifications for RN7SL652P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL652P Gene

Domains & Families for RN7SL652P Gene

Gene Families for RN7SL652P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL652P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL652P Gene

Function for RN7SL652P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL652P Gene

Localization for RN7SL652P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL652P Gene

Pathways & Interactions for RN7SL652P Gene

SuperPathways for RN7SL652P Gene

No Data Available

Interacting Proteins for RN7SL652P Gene

Gene Ontology (GO) - Biological Process for RN7SL652P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL652P Gene

Drugs & Compounds for RN7SL652P Gene

No Compound Related Data Available

Transcripts for RN7SL652P Gene

mRNA/cDNA for RN7SL652P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL652P Gene

No ASD Table

Relevant External Links for RN7SL652P Gene

GeneLoc Exon Structure for
RN7SL652P
ECgene alternative splicing isoforms for
RN7SL652P

Expression for RN7SL652P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL652P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL652P Gene:

RN7SL652P
genes like me logo Genes that share expression patterns with RN7SL652P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL652P Gene

Orthologs for RN7SL652P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL652P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 97 (a)
OneToOne
Species where no ortholog for RN7SL652P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL652P Gene

ENSEMBL:
Gene Tree for RN7SL652P (if available)
TreeFam:
Gene Tree for RN7SL652P (if available)

Paralogs for RN7SL652P Gene

No data available for Paralogs for RN7SL652P Gene

Variants for RN7SL652P Gene

Relevant External Links for RN7SL652P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL652P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL652P Gene

Disorders for RN7SL652P Gene

No disorders were found for RN7SL652P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL652P Gene

Publications for RN7SL652P Gene

No publications were found for RN7SL652P Gene.

Products for RN7SL652P Gene

Sources for RN7SL652P Gene

Content
Loading form....