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Aliases for RN7SL587P Gene

Subcategory (RNA class) for RN7SL587P Gene

lncRNA

Aliases for RN7SL587P Gene

  • RNA, 7SL, Cytoplasmic 587, Pseudogene 2 3 5

External Ids for RN7SL587P Gene

ORGUL Members for RN7SL587P Gene

Previous GeneCards Identifiers for RN7SL587P Gene

  • GC14M078015

Summaries for RN7SL587P Gene

GeneCards Summary for RN7SL587P Gene

RN7SL587P (RNA, 7SL, Cytoplasmic 587, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL587P Gene

Genomics for RN7SL587P Gene

Regulatory Elements for RN7SL587P Gene

Enhancers for RN7SL587P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G077541 1.2 Ensembl ENCODE dbSUPER 0.7 +4.5 4549 3.4 HDGF FOXA2 FEZF1 TBX21 ATF2 NR2F2 TCF12 ZFHX2 JUND PRDM6 TMED8 AHSA1 VIPAS39 SAMD15 SPTLC2 ISM2 RN7SL587P GC14M077506
GH14G077552 0.8 ENCODE dbSUPER 0.7 -3.7 -3687 0.2 CTCF ZNF654 TRIM22 SMC3 REST RAD21 VIPAS39 AHSA1 GSTZ1 POMT2 ZDHHC22 SAMD15 TMED8 SPTLC2 RN7SL587P
GH14G077565 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.0 -17955 1.6 HLF FOS NR3C1 SPTLC2 GSTZ1 POMT2 SNW1 RN7SL587P
GH14G077588 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -43.7 -43714 7.0 NFIB ZFP64 BMI1 ZNF121 GATA2 CBX5 RELB ETV6 IKZF2 ZBTB11 SPTLC2 ADCK1 SNW1 RPL22P2 POMT2 ZMYND19P1 VASH1 ENSG00000259081 NGB ALKBH1
GH14G077553 1.1 Ensembl ENCODE dbSUPER 0.4 -6.8 -6834 1.5 ZNF121 EED IKZF1 RELB ETV6 IKZF2 SPTLC2 ADCK1 RN7SL587P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL587P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL587P Gene

Chromosome:
14
Start:
77,547,566 bp from pter
End:
77,547,846 bp from pter
Size:
281 bases
Orientation:
Minus strand

Genomic View for RN7SL587P Gene

Genes around RN7SL587P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL587P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL587P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL587P Gene

Proteins for RN7SL587P Gene

Post-translational modifications for RN7SL587P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL587P Gene

Domains & Families for RN7SL587P Gene

Gene Families for RN7SL587P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL587P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL587P Gene

Function for RN7SL587P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL587P Gene

Localization for RN7SL587P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL587P Gene

Pathways & Interactions for RN7SL587P Gene

SuperPathways for RN7SL587P Gene

No Data Available

Interacting Proteins for RN7SL587P Gene

Gene Ontology (GO) - Biological Process for RN7SL587P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL587P Gene

Drugs & Compounds for RN7SL587P Gene

No Compound Related Data Available

Transcripts for RN7SL587P Gene

mRNA/cDNA for RN7SL587P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL587P Gene

No ASD Table

Relevant External Links for RN7SL587P Gene

GeneLoc Exon Structure for
RN7SL587P
ECgene alternative splicing isoforms for
RN7SL587P

Expression for RN7SL587P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL587P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL587P Gene

This gene is overexpressed in Whole Blood (x14.6).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL587P Gene:

RN7SL587P
genes like me logo Genes that share expression patterns with RN7SL587P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL587P Gene

Orthologs for RN7SL587P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL587P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 96 (a)
OneToOne
Species where no ortholog for RN7SL587P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL587P Gene

ENSEMBL:
Gene Tree for RN7SL587P (if available)
TreeFam:
Gene Tree for RN7SL587P (if available)

Paralogs for RN7SL587P Gene

No data available for Paralogs for RN7SL587P Gene

Variants for RN7SL587P Gene

Relevant External Links for RN7SL587P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL587P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL587P Gene

Disorders for RN7SL587P Gene

No disorders were found for RN7SL587P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL587P Gene

Publications for RN7SL587P Gene

No publications were found for RN7SL587P Gene.

Products for RN7SL587P Gene

Sources for RN7SL587P Gene

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