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Aliases for RN7SL45P Gene

Subcategory (RNA class) for RN7SL45P Gene

lncRNA

Aliases for RN7SL45P Gene

  • RNA, 7SL, Cytoplasmic 45, Pseudogene 2 3 5

External Ids for RN7SL45P Gene

ORGUL Members for RN7SL45P Gene

Previous GeneCards Identifiers for RN7SL45P Gene

  • GC17P029847

Summaries for RN7SL45P Gene

GeneCards Summary for RN7SL45P Gene

RN7SL45P (RNA, 7SL, Cytoplasmic 45, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SL45P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL45P Gene

Genomics for RN7SL45P Gene

Regulatory Elements for RN7SL45P Gene

Enhancers for RN7SL45P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H031517 0.9 ENCODE dbSUPER 0.7 -0.7 -735 0 CTCF ZNF654 REST ZIC2 RAD21 CTBP1 GLIS2 ZBTB48 GLIS1 IKZF1 RN7SL45P GC17P031509
GH17H031506 1.4 Ensembl ENCODE dbSUPER 0.4 -8.5 -8516 6 HDAC1 TBP PKNOX1 ATF1 TBL1XR1 ARNT ZBTB40 RAD21 ZNF766 GATA2 RAB11FIP4 LRRC37BP1 GC17P031509 RN7SL45P
GH17H031533 1.3 Ensembl ENCODE dbSUPER 0.4 +15.4 15399 1 CTCF RAD21 ZNF121 ZFHX2 ZNF316 EGR1 PATZ1 SMC3 FOS ZNF600 RAB11FIP4 ENSG00000278977 RN7SL45P
GH17H031513 0.7 dbSUPER 0.7 -3.2 -3208 2 L3MBTL2 ZMYM3 MNT ZIC2 ZKSCAN1 ZBTB5 ZFHX2 POLR2A ZBTB33 EGR2 RN7SL45P GC17P031509
GH17H031525 1.1 ENCODE dbSUPER 0.4 +7.1 7066 0 HDGF PKNOX1 RB1 ARID4B SIN3A RAD21 SCRT2 ZNF143 RCOR1 RUNX3 RN7SL45P ENSG00000278977
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL45P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL45P Gene

Chromosome:
17
Start:
31,518,432 bp from pter
End:
31,518,729 bp from pter
Size:
298 bases
Orientation:
Plus strand

Genomic View for RN7SL45P Gene

Genes around RN7SL45P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL45P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL45P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL45P Gene

Proteins for RN7SL45P Gene

Post-translational modifications for RN7SL45P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL45P Gene

Domains & Families for RN7SL45P Gene

Gene Families for RN7SL45P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL45P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL45P Gene

Function for RN7SL45P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL45P Gene

Localization for RN7SL45P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL45P Gene

Pathways & Interactions for RN7SL45P Gene

SuperPathways for RN7SL45P Gene

No Data Available

Interacting Proteins for RN7SL45P Gene

Gene Ontology (GO) - Biological Process for RN7SL45P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL45P Gene

Drugs & Compounds for RN7SL45P Gene

No Compound Related Data Available

Transcripts for RN7SL45P Gene

mRNA/cDNA for RN7SL45P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL45P Gene

No ASD Table

Relevant External Links for RN7SL45P Gene

GeneLoc Exon Structure for
RN7SL45P
ECgene alternative splicing isoforms for
RN7SL45P

Expression for RN7SL45P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL45P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL45P Gene:

RN7SL45P
genes like me logo Genes that share expression patterns with RN7SL45P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL45P Gene

Orthologs for RN7SL45P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL45P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 100 (a)
OneToOne
Species where no ortholog for RN7SL45P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL45P Gene

ENSEMBL:
Gene Tree for RN7SL45P (if available)
TreeFam:
Gene Tree for RN7SL45P (if available)

Paralogs for RN7SL45P Gene

No data available for Paralogs for RN7SL45P Gene

Variants for RN7SL45P Gene

Relevant External Links for RN7SL45P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL45P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL45P Gene

Disorders for RN7SL45P Gene

No disorders were found for RN7SL45P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL45P Gene

Publications for RN7SL45P Gene

No publications were found for RN7SL45P Gene.

Products for RN7SL45P Gene

Sources for RN7SL45P Gene

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