Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RN7SL44P Gene

Subcategory (RNA class) for RN7SL44P Gene

SRP

Aliases for RN7SL44P Gene

  • RNA, 7SL, Cytoplasmic 44, Pseudogene 2 3 5

External Ids for RN7SL44P Gene

ORGUL Members for RN7SL44P Gene

Summaries for RN7SL44P Gene

GeneCards Summary for RN7SL44P Gene

RN7SL44P (RNA, 7SL, Cytoplasmic 44, Pseudogene) is a Pseudogene, and is affiliated with the SRP RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL44P Gene

Genomics for RN7SL44P Gene

Regulatory Elements for RN7SL44P Gene

Enhancers for RN7SL44P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F153531 1.4 FANTOM5 ENCODE 10.7 -34.4 -34367 8.2 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF143 FOS S100A3 INTS3 CHTOP ENSG00000272654 RN7SL44P S100A7L2 PGLYRP3 SLC39A1 S100A6 PIR41635
GH01F153510 1.3 Ensembl ENCODE 9.8 -10.5 -10474 0.9 ATF1 PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 BRCA1 ZNF2 RN7SL44P S100A3 GC01M153500 ENSG00000238279
GH01F153505 1.1 Ensembl ENCODE 11.2 -6.5 -6535 3.0 PKNOX1 RAD21 RARA FOS EGR2 ZNF263 MXD4 NR2F2 MAFF SMARCA4 RN7SL44P S100A3 GC01M153500 ENSG00000238279
GH01F153514 1.3 FANTOM5 Ensembl ENCODE 8.4 -15.0 -15037 2.4 TBP KLF1 TAF1 ETV1 MAX ZMYM3 CEBPG POLR2A SMC3 SP3 S100A3 RN7SL44P S100A2 S100A14 PGLYRP4 S100A6 S100A16 GC01M153500 ENSG00000238279
GH01F153489 1.2 Ensembl ENCODE 7.3 +9.9 9937 2.1 SIN3A FEZF1 ZNF2 FOS DEK SP3 REST TSHZ1 ZNF518A ZNF623 PGLYRP4 S100A9 RNU6-160P S100A1 CHTOP S100A13 PGLYRP3 RN7SL44P S100A3 GC01M153500
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL44P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL44P Gene

Chromosome:
1
Start:
153,500,463 bp from pter
End:
153,500,764 bp from pter
Size:
302 bases
Orientation:
Minus strand

Genomic View for RN7SL44P Gene

Genes around RN7SL44P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL44P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL44P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL44P Gene

Proteins for RN7SL44P Gene

Post-translational modifications for RN7SL44P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL44P Gene

Domains & Families for RN7SL44P Gene

Gene Families for RN7SL44P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL44P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL44P Gene

Function for RN7SL44P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL44P Gene

Localization for RN7SL44P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL44P Gene

Pathways & Interactions for RN7SL44P Gene

SuperPathways for RN7SL44P Gene

No Data Available

Interacting Proteins for RN7SL44P Gene

Gene Ontology (GO) - Biological Process for RN7SL44P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL44P Gene

Transcripts for RN7SL44P Gene

mRNA/cDNA for RN7SL44P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL44P Gene

No ASD Table

Relevant External Links for RN7SL44P Gene

GeneLoc Exon Structure for
RN7SL44P
ECgene alternative splicing isoforms for
RN7SL44P

Expression for RN7SL44P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL44P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL44P Gene:

RN7SL44P
genes like me logo Genes that share expression patterns with RN7SL44P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RN7SL44P Gene

Orthologs for RN7SL44P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL44P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 98 (a)
OneToOne
Species where no ortholog for RN7SL44P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL44P Gene

ENSEMBL:
Gene Tree for RN7SL44P (if available)
TreeFam:
Gene Tree for RN7SL44P (if available)

Paralogs for RN7SL44P Gene

No data available for Paralogs for RN7SL44P Gene

Variants for RN7SL44P Gene

Relevant External Links for RN7SL44P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL44P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL44P Gene

Disorders for RN7SL44P Gene

No disorders were found for RN7SL44P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL44P Gene

Publications for RN7SL44P Gene

No publications were found for RN7SL44P Gene.

Products for RN7SL44P Gene

Sources for RN7SL44P Gene

Content
Loading form....