Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RN7SL41P Gene

Subcategory (RNA class) for RN7SL41P Gene

lncRNA

Aliases for RN7SL41P Gene

  • RNA, 7SL, Cytoplasmic 41, Pseudogene 2 3 5

External Ids for RN7SL41P Gene

ORGUL Members for RN7SL41P Gene

Previous GeneCards Identifiers for RN7SL41P Gene

  • GC08P081118

Summaries for RN7SL41P Gene

GeneCards Summary for RN7SL41P Gene

RN7SL41P (RNA, 7SL, Cytoplasmic 41, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SL41P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL41P Gene

Genomics for RN7SL41P Gene

Regulatory Elements for RN7SL41P Gene

Enhancers for RN7SL41P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H080206 0.7 ENCODE 0.7 +3.0 3049 2 SOX13 FOXA2 JUN MAX POLR2A RCOR1 FOSL2 FOS GATAD2A SOX5 TPD52 RNU6-1213P RN7SL41P
GH08H080167 1.6 Ensembl ENCODE dbSUPER 0.3 -34.7 -34742 5 HDGF SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B ZNF143 ZNF207 FOS ZHX2 TPD52 ENSG00000254205 RN7SL41P
GH08H080142 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -57.8 -57848 8 PKNOX1 FOXA2 MLX ZBTB7B ZNF207 ATF7 RUNX3 JUNB REST PPARG TPD52 ENSG00000254205 ENSG00000251867 RN7SL41P
GH08H080136 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -65.7 -65686 5 PKNOX1 TBL1XR1 RB1 ZSCAN4 FEZF1 BATF SCRT2 ATF7 ETV6 RUNX3 TPD52 RNU6-1213P ENSG00000254205 RN7SL41P
GH08H080230 1.1 Ensembl ENCODE 0.3 +26.2 26212 1 ELF3 RB1 ARID4B ZNF2 ZBTB40 RAD21 RFX5 SLC30A9 ZNF143 RCOR1 TPD52 RN7SL41P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL41P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL41P Gene

Chromosome:
8
Start:
80,204,606 bp from pter
End:
80,204,902 bp from pter
Size:
297 bases
Orientation:
Plus strand

Genomic View for RN7SL41P Gene

Genes around RN7SL41P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL41P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL41P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL41P Gene

Proteins for RN7SL41P Gene

Post-translational modifications for RN7SL41P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL41P Gene

Domains & Families for RN7SL41P Gene

Gene Families for RN7SL41P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL41P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL41P Gene

Function for RN7SL41P Gene

Phenotypes From GWAS Catalog for RN7SL41P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL41P Gene

Localization for RN7SL41P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL41P Gene

Pathways & Interactions for RN7SL41P Gene

SuperPathways for RN7SL41P Gene

No Data Available

Interacting Proteins for RN7SL41P Gene

Gene Ontology (GO) - Biological Process for RN7SL41P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL41P Gene

Drugs & Compounds for RN7SL41P Gene

No Compound Related Data Available

Transcripts for RN7SL41P Gene

mRNA/cDNA for RN7SL41P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL41P Gene

No ASD Table

Relevant External Links for RN7SL41P Gene

GeneLoc Exon Structure for
RN7SL41P
ECgene alternative splicing isoforms for
RN7SL41P

Expression for RN7SL41P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL41P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL41P Gene:

RN7SL41P
genes like me logo Genes that share expression patterns with RN7SL41P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL41P Gene

Orthologs for RN7SL41P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SL41P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 97 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii Metazoa_SRP 34
  • 68 (a)
ManyToMany
Species where no ortholog for RN7SL41P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RN7SL41P Gene

ENSEMBL:
Gene Tree for RN7SL41P (if available)
TreeFam:
Gene Tree for RN7SL41P (if available)

Paralogs for RN7SL41P Gene

No data available for Paralogs for RN7SL41P Gene

Variants for RN7SL41P Gene

Relevant External Links for RN7SL41P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL41P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL41P Gene

Disorders for RN7SL41P Gene

No disorders were found for RN7SL41P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL41P Gene

Publications for RN7SL41P Gene

No publications were found for RN7SL41P Gene.

Products for RN7SL41P Gene

Sources for RN7SL41P Gene

Content
Loading form....