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Aliases for RN7SL317P Gene

Subcategory (RNA class) for RN7SL317P Gene

lncRNA

Aliases for RN7SL317P Gene

  • RNA, 7SL, Cytoplasmic 317, Pseudogene 2 3 5

External Ids for RN7SL317P Gene

ORGUL Members for RN7SL317P Gene

Previous GeneCards Identifiers for RN7SL317P Gene

  • GC19P054133

Summaries for RN7SL317P Gene

GeneCards Summary for RN7SL317P Gene

RN7SL317P (RNA, 7SL, Cytoplasmic 317, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL317P Gene

Genomics for RN7SL317P Gene

Regulatory Elements for RN7SL317P Gene

Enhancers for RN7SL317P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G053656 1.3 ENCODE dbSUPER 11.9 +28.5 28488 2.4 HDGF FOXA2 PKNOX1 ATF1 MLX CREB3L1 ARID4B SIN3A ZNF2 YY1 RN7SL317P DPRX RNU6-698P LOC100288093
GH19G053840 1.3 Ensembl ENCODE 10.5 +212.4 212416 2.7 PKNOX1 ATF1 ARNT ARID4B SIN3A YBX1 GATA2 ZNF143 FOS SP3 LOC105372457 ENSG00000232220 PRKCG MIR935 CACNG6 MIR1283-1 MIR520A MIR519C MIR515-2 MIR515-1
GH19G053511 1.2 Ensembl ENCODE 10.4 -117.7 -117713 0.4 PKNOX1 ARID4B KLF17 INSM2 FEZF1 ZNF2 RAD21 GLIS2 ZNF366 ZNF143 DPRX RN7SL317P RNU6-698P ENSG00000274892 ZNF331
GH19G053660 1 ENCODE dbSUPER 11.9 +29.8 29789 0.2 HDAC1 CTCF ATF1 SAP30 MAX SIN3A RBBP5 RAD21 GATA3 POLR2A MIR520A RN7SL317P DPRX MIR526B MIR519B MIR525 MIR518B MIR518F MIR520B MIR520C
GH19G053844 1.1 FANTOM5 Ensembl ENCODE 10.5 +215.4 215381 0.6 ZNF121 HLF CEBPB CEBPG ATF2 LOC105372457 PRKCG ENSG00000232220 MIR935 CACNG6 MIR520A MIR1283-1 MIR519C MIR515-1 MIR519E
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL317P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL317P Gene

Chromosome:
19
Start:
53,629,713 bp from pter
End:
53,630,041 bp from pter
Size:
329 bases
Orientation:
Plus strand

Genomic View for RN7SL317P Gene

Genes around RN7SL317P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL317P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL317P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL317P Gene

Proteins for RN7SL317P Gene

Post-translational modifications for RN7SL317P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL317P Gene

Domains & Families for RN7SL317P Gene

Gene Families for RN7SL317P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL317P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL317P Gene

Function for RN7SL317P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL317P Gene

Localization for RN7SL317P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL317P Gene

Pathways & Interactions for RN7SL317P Gene

SuperPathways for RN7SL317P Gene

No Data Available

Interacting Proteins for RN7SL317P Gene

Gene Ontology (GO) - Biological Process for RN7SL317P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL317P Gene

Drugs & Compounds for RN7SL317P Gene

No Compound Related Data Available

Transcripts for RN7SL317P Gene

mRNA/cDNA for RN7SL317P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL317P Gene

No ASD Table

Relevant External Links for RN7SL317P Gene

GeneLoc Exon Structure for
RN7SL317P
ECgene alternative splicing isoforms for
RN7SL317P

Expression for RN7SL317P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL317P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL317P Gene:

RN7SL317P
genes like me logo Genes that share expression patterns with RN7SL317P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL317P Gene

Orthologs for RN7SL317P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL317P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 89 (a)
OneToOne
Species where no ortholog for RN7SL317P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL317P Gene

ENSEMBL:
Gene Tree for RN7SL317P (if available)
TreeFam:
Gene Tree for RN7SL317P (if available)

Paralogs for RN7SL317P Gene

No data available for Paralogs for RN7SL317P Gene

Variants for RN7SL317P Gene

Relevant External Links for RN7SL317P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL317P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL317P Gene

Disorders for RN7SL317P Gene

No disorders were found for RN7SL317P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL317P Gene

Publications for RN7SL317P Gene

No publications were found for RN7SL317P Gene.

Products for RN7SL317P Gene

Sources for RN7SL317P Gene

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