Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RN7SL277P Gene

Subcategory (RNA class) for RN7SL277P Gene

antisense

Aliases for RN7SL277P Gene

  • RNA, 7SL, Cytoplasmic 277, Pseudogene 2 3 5

External Ids for RN7SL277P Gene

ORGUL Members for RN7SL277P Gene

Previous GeneCards Identifiers for RN7SL277P Gene

  • GC01P019751

Summaries for RN7SL277P Gene

GeneCards Summary for RN7SL277P Gene

RN7SL277P (RNA, 7SL, Cytoplasmic 277, Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RN7SL277P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL277P Gene

Genomics for RN7SL277P Gene

GeneHancer (GH) Regulatory Elements for RN7SL277P Gene

Promoters and enhancers for RN7SL277P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I019422 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +2.7 2697 8.6 FOXA2 ARID4B DMAP1 ZNF48 YY1 FOS RXRA SP5 NFYC REST CAPZB RNU4-28P HTR6 AKR7A2 RN7SL277P PIR41915
GH01I019432 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.5 27457 39.4 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 CAPZB EMC1 NBL1 RNU4-28P HTR6 AKR7A2 OTUD3 AKR7A3 PQLC2 UBR4
GH01I019404 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -17.9 -17947 3.9 HDAC1 HNRNPUL1 PKNOX1 RB1 ARNT TCF12 GATA2 RCOR1 ATF7 CREM CAPZB AKR7A2 UBR4 PQLC2 RNU6-1099P NBL1 RNU4-28P EMC1 RN7SL277P GC01P019361
GH01I019383 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -38.5 -38547 4.6 FOXA2 ARID4B DMAP1 ZNF48 SLC30A9 RXRA SP5 KAT8 NFIL3 RCOR2 CAPZB AKR7A2 LOC105378614 MINOS1 RNU4-28P NBL1 HTR6 PQLC2 GC01P019361 RN7SL277P
GH01I019413 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -7.5 -7465 8.1 ZNF766 FOXA2 ZNF24 ZNF7 SPI1 RNU4-28P CAPZB HTR6 AKR7A2 PQLC2 EMC1 RN7SL277P GC01P019361
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SL277P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL277P Gene

Genomic Locations for RN7SL277P Gene
chr1:19,424,384-19,424,671
(GRCh38/hg38)
Size:
288 bases
Orientation:
Plus strand
chr1:19,750,878-19,751,163
(GRCh37/hg19)

Genomic View for RN7SL277P Gene

Genes around RN7SL277P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL277P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL277P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL277P Gene

Proteins for RN7SL277P Gene

Post-translational modifications for RN7SL277P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL277P Gene

Domains & Families for RN7SL277P Gene

Gene Families for RN7SL277P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL277P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL277P Gene

Function for RN7SL277P Gene

Phenotypes From GWAS Catalog for RN7SL277P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL277P Gene

Localization for RN7SL277P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL277P Gene

Pathways & Interactions for RN7SL277P Gene

SuperPathways for RN7SL277P Gene

No Data Available

Interacting Proteins for RN7SL277P Gene

Gene Ontology (GO) - Biological Process for RN7SL277P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL277P Gene

Drugs & Compounds for RN7SL277P Gene

No Compound Related Data Available

Transcripts for RN7SL277P Gene

mRNA/cDNA for RN7SL277P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL277P Gene

No ASD Table

Relevant External Links for RN7SL277P Gene

GeneLoc Exon Structure for
RN7SL277P
ECgene alternative splicing isoforms for
RN7SL277P

Expression for RN7SL277P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL277P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL277P Gene:

RN7SL277P
genes like me logo Genes that share expression patterns with RN7SL277P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL277P Gene

Orthologs for RN7SL277P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RN7SL277P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia Metazoa_SRP 34
  • 58 (a)
OneToMany
Species where no ortholog for RN7SL277P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL277P Gene

ENSEMBL:
Gene Tree for RN7SL277P (if available)
TreeFam:
Gene Tree for RN7SL277P (if available)

Paralogs for RN7SL277P Gene

No data available for Paralogs for RN7SL277P Gene

Variants for RN7SL277P Gene

Additional Variant Information for RN7SL277P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL277P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL277P Gene

Disorders for RN7SL277P Gene

No disorders were found for RN7SL277P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL277P Gene

Publications for RN7SL277P Gene

No publications were found for RN7SL277P Gene.

Products for RN7SL277P Gene

Sources for RN7SL277P Gene

Content
Loading form....