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Aliases for RN7SL268P Gene

Subcategory (RNA class) for RN7SL268P Gene


Aliases for RN7SL268P Gene

  • RNA, 7SL, Cytoplasmic 268, Pseudogene 2 3 5

External Ids for RN7SL268P Gene

ORGUL Members for RN7SL268P Gene

Previous GeneCards Identifiers for RN7SL268P Gene

  • GC22M024223

Summaries for RN7SL268P Gene

GeneCards Summary for RN7SL268P Gene

RN7SL268P (RNA, 7SL, Cytoplasmic 268, Pseudogene) is a Pseudogene, and is affiliated with the SRP RNA class.

fRNAdb sequence ontologies for RN7SL268P Gene

  • Metazoan signal recognition particle RNA: The signal recognition particle (SRP) is a universally conserved ribonucleoprotein. It is involved in the co-translational targeting of proteins to membranes. The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. Eukaryotic and archaeal 7S RNAs have very similar secondary structures, as represented by this family. Eight helical elements fold into the Alu and S domains, separated by a long linker region [1,2]. The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP [1]. The universally conserved helix which interacts with the SRP54 M domain mediates signal sequence recognition [2,3]. In eukaryotes and archaea, the SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilises helix 8 for SRP54 binding [1]. The Signal Recognition Particle Database (SRPDB) [4] provides compilations of SRP components, with phylogenetic data and structural illustrations. Many sequences below the threshold for this family are clearly closely related, but are most likely to be SRP RNA derived pseudogenes. The human genome in particular is known to contain a large amount of SRP RNA related sequence, including Alu repeats. While the threshold of this family is set high so as to minimise the number of hits to such regions, it is likely that some remain.

Additional gene information for RN7SL268P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RN7SL268P Gene

Genomics for RN7SL268P Gene

Regulatory Elements for RN7SL268P Gene

Enhancers for RN7SL268P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H024242 1.6 FANTOM5 Ensembl ENCODE 17.5 -365.4 -365439 6.1 HDGF ARNT ZNF493 ZFP64 ARID4B SIN3A GLI4 ZBTB7B ZNF207 ZNF143 ENSG00000272578 ZNF70 SPECC1L POM121L9P ENSG00000232545 ENSG00000272973 SNRPD3 MIF-AS1 RN7SL268P SUSD2
GH22H024010 1.4 ENCODE dbSUPER 17.5 -131.9 -131853 2.5 PKNOX1 FOXA2 ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF143 ZNF207 FOS ENSG00000272973 ZDHHC8P1 ZNF70 SPECC1L MIF-AS1 SNRPD3 SUSD2 RN7SL268P GNAZ ENSG00000272578
GH22H023178 1.6 FANTOM5 ENCODE dbSUPER 9.8 +696.1 696112 10.4 HDGF PKNOX1 ARNT ZFP64 ARID4B FEZF1 ZNF2 ZNF121 GLIS2 ZNF143 RSPH14 BCR RAB36 IGLV5-52 RN7SL268P IGLV1-40 BCRP8 RN7SL263P
GH22H024809 0.7 ENCODE 17.4 -930.6 -930581 1.6 MXI1 RFX1 MAX FEZF1 REST ZNF398 BMI1 ZFHX2 POLR2A MYNN RN7SL268P PIWIL3 SGSM1 ENSG00000272973 GSTT2 PIR59021
GH22H023692 1 Ensembl ENCODE 10.5 +184.6 184607 6.3 CTCF EBF1 POLR2A EED ETV6 RUNX3 IKZF2 CREM ZNF687 CBFB ENSG00000234353 C22orf15 CHCHD10 MMP11 ZNF70 VPREB3 SMARCB1 ENSG00000251357 SLC2A11 RN7SL268P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL268P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL268P Gene

Genomic Locations for RN7SL268P Gene
298 bases
Minus strand

Genomic View for RN7SL268P Gene

Genes around RN7SL268P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL268P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL268P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL268P Gene

Proteins for RN7SL268P Gene

Post-translational modifications for RN7SL268P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL268P Gene

Domains & Families for RN7SL268P Gene

Gene Families for RN7SL268P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL268P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL268P Gene

Function for RN7SL268P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL268P Gene

Localization for RN7SL268P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL268P Gene

Pathways & Interactions for RN7SL268P Gene

SuperPathways for RN7SL268P Gene

No Data Available

Interacting Proteins for RN7SL268P Gene

Gene Ontology (GO) - Biological Process for RN7SL268P Gene


No data available for Pathways by source and SIGNOR curated interactions for RN7SL268P Gene

Drugs & Compounds for RN7SL268P Gene

No Compound Related Data Available

Transcripts for RN7SL268P Gene

mRNA/cDNA for RN7SL268P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL268P Gene

No ASD Table

Relevant External Links for RN7SL268P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RN7SL268P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL268P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL268P Gene

This gene is overexpressed in Brain - Cerebellum (x4.8) and Brain - Cerebellar Hemisphere (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL268P Gene:

genes like me logo Genes that share expression patterns with RN7SL268P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL268P Gene

Orthologs for RN7SL268P Gene

Evolution for RN7SL268P Gene

Gene Tree for RN7SL268P (if available)
Gene Tree for RN7SL268P (if available)

No data available for Orthologs for RN7SL268P Gene

Paralogs for RN7SL268P Gene

No data available for Paralogs for RN7SL268P Gene

Variants for RN7SL268P Gene

Relevant External Links for RN7SL268P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL268P Gene

Disorders for RN7SL268P Gene

No disorders were found for RN7SL268P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL268P Gene

Publications for RN7SL268P Gene

No publications were found for RN7SL268P Gene.

Products for RN7SL268P Gene

Sources for RN7SL268P Gene

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