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Aliases for RN7SL22P Gene

Subcategory (RNA class) for RN7SL22P Gene

lncRNA

Aliases for RN7SL22P Gene

  • RNA, 7SL, Cytoplasmic 22, Pseudogene 2 3 5

External Ids for RN7SL22P Gene

ORGUL Members for RN7SL22P Gene

Previous GeneCards Identifiers for RN7SL22P Gene

  • GC09P035672
  • GC09P035674
  • GC09P035675
  • GC09P035676
  • GC09P035677
  • GC09P035678
  • GC09P035679

Summaries for RN7SL22P Gene

GeneCards Summary for RN7SL22P Gene

RN7SL22P (RNA, 7SL, Cytoplasmic 22, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SL22P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL22P Gene

Genomics for RN7SL22P Gene

Regulatory Elements for RN7SL22P Gene

Enhancers for RN7SL22P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H035656 1.7 Ensembl ENCODE dbSUPER 14.9 -10.8 -10811 9 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ARHGEF39 VCP RGP1 C9orf131 PIGO RN7SL22P NPR2 YBX1P10 RECK ENSG00000230074
GH09H035726 1.7 FANTOM5 ENCODE dbSUPER 11.6 +58.6 58639 8 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A YBX1 DMAP1 ZBTB7B YY1 TPM2 TMEM8B ARHGEF39 GBA2 CCDC107 TLN1 HMGB3P24 PIGO RN7SL22P ENSG00000228843
GH09H035602 1.5 FANTOM5 ENCODE 11.2 -67.1 -67139 3 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF143 DEK CD72 ENSG00000231393 LOC101926948 CCDC107 RN7SL22P ARHGEF39 VCP RUSC2 TMEM8B SPAG8
GH09H035634 1.3 Ensembl ENCODE dbSUPER 11.8 -34.5 -34542 6 TBP HDGF CEBPG BMI1 EGR1 EED ATF7 RUNX3 IKZF2 NR2F1 ARHGEF39 CA9 CCDC107 CD72 RN7SL22P GBA2 RGP1 MSMP ENSG00000228843 VCP
GH09H035616 1.1 ENCODE dbSUPER 12.1 -52.5 -52522 6 HDGF PKNOX1 ATF1 RB1 BATF RFX5 ETS1 SCRT2 ZNF143 ETV6 CCDC107 RN7SL22P ARHGEF39 SIT1 CA9 FAM166B CREB3 TLN1 GBA2 CD72
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL22P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL22P Gene

Chromosome:
9
Start:
35,671,776 bp from pter
End:
35,672,044 bp from pter
Size:
269 bases
Orientation:
Plus strand

Genomic View for RN7SL22P Gene

Genes around RN7SL22P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL22P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL22P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL22P Gene

Proteins for RN7SL22P Gene

Post-translational modifications for RN7SL22P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL22P Gene

Domains & Families for RN7SL22P Gene

Gene Families for RN7SL22P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL22P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL22P Gene

Function for RN7SL22P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL22P Gene

Localization for RN7SL22P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL22P Gene

Pathways & Interactions for RN7SL22P Gene

SuperPathways for RN7SL22P Gene

No Data Available

Interacting Proteins for RN7SL22P Gene

Gene Ontology (GO) - Biological Process for RN7SL22P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL22P Gene

Drugs & Compounds for RN7SL22P Gene

No Compound Related Data Available

Transcripts for RN7SL22P Gene

mRNA/cDNA for RN7SL22P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL22P Gene

No ASD Table

Relevant External Links for RN7SL22P Gene

GeneLoc Exon Structure for
RN7SL22P
ECgene alternative splicing isoforms for
RN7SL22P

Expression for RN7SL22P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL22P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL22P Gene:

RN7SL22P
genes like me logo Genes that share expression patterns with RN7SL22P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL22P Gene

Orthologs for RN7SL22P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SL22P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 99 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii Metazoa_SRP 34
  • 68 (a)
ManyToMany
Species where no ortholog for RN7SL22P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RN7SL22P Gene

ENSEMBL:
Gene Tree for RN7SL22P (if available)
TreeFam:
Gene Tree for RN7SL22P (if available)

Paralogs for RN7SL22P Gene

No data available for Paralogs for RN7SL22P Gene

Variants for RN7SL22P Gene

Relevant External Links for RN7SL22P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL22P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL22P Gene

Disorders for RN7SL22P Gene

No disorders were found for RN7SL22P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL22P Gene

Publications for RN7SL22P Gene

No publications were found for RN7SL22P Gene.

Products for RN7SL22P Gene

Sources for RN7SL22P Gene

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