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Aliases for RN7SL213P Gene

Subcategory (RNA class) for RN7SL213P Gene

lncRNA

Aliases for RN7SL213P Gene

  • RNA, 7SL, Cytoplasmic 213, Pseudogene 2 3 5

External Ids for RN7SL213P Gene

ORGUL Members for RN7SL213P Gene

Previous GeneCards Identifiers for RN7SL213P Gene

  • GC14M068220

Summaries for RN7SL213P Gene

GeneCards Summary for RN7SL213P Gene

RN7SL213P (RNA, 7SL, Cytoplasmic 213, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL213P Gene

Genomics for RN7SL213P Gene

Regulatory Elements for RN7SL213P Gene

Enhancers for RN7SL213P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G068508 2.1 VISTA Ensembl ENCODE dbSUPER 11 -760.5 -760465 6.8 FOXA2 PKNOX1 MLX ARID4B SIN3A DMAP1 ZBTB7B YY1 FOS ZNF263 DDX18P1 RN7SL213P PIR53204 GC14P068551
GH14G068679 2 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -933.7 -933685 12.1 HDGF HNRNPUL1 PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B DDX18P1 RNU6-921P RN7SL213P PLEKHD1 SUSD6 ZFP36L1 DCAF5 ENSG00000258623 GC14P068562
GH14G068574 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -826.6 -826630 6.8 FOXA2 ARID4B SIN3A DMAP1 BRCA1 ZNF48 YY1 GTF3C2 ZNF766 GATA2 DDX18P1 RN7SL213P ZFP36L1 GC14P068562 ENSG00000258623
GH14G068327 1.1 dbSUPER 11 -577.1 -577124 1.7 HDGF CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 ZNF207 DDX18P1 RN7SL213P ZFYVE26 RPL7AP5 GC14P068302
GH14G068322 0.7 ENCODE 11 -571.7 -571682 0.6 CTCF SMAD5 RNF2 NR2F1 SIN3A NR3C1 JUND POLR2A PRPF4 ZBTB33 DDX18P1 RN7SL213P ZFYVE26 RPL7AP5 GC14P068302
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RN7SL213P on UCSC Golden Path with GeneCards custom track

Genomic Location for RN7SL213P Gene

Chromosome:
14
Start:
67,751,228 bp from pter
End:
67,751,544 bp from pter
Size:
317 bases
Orientation:
Minus strand

Genomic View for RN7SL213P Gene

Genes around RN7SL213P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL213P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL213P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL213P Gene

Proteins for RN7SL213P Gene

Post-translational modifications for RN7SL213P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL213P Gene

Domains & Families for RN7SL213P Gene

Gene Families for RN7SL213P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL213P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL213P Gene

Function for RN7SL213P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL213P Gene

Localization for RN7SL213P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RN7SL213P Gene

Pathways & Interactions for RN7SL213P Gene

SuperPathways for RN7SL213P Gene

No Data Available

Interacting Proteins for RN7SL213P Gene

Gene Ontology (GO) - Biological Process for RN7SL213P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL213P Gene

Drugs & Compounds for RN7SL213P Gene

No Compound Related Data Available

Transcripts for RN7SL213P Gene

mRNA/cDNA for RN7SL213P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL213P Gene

No ASD Table

Relevant External Links for RN7SL213P Gene

GeneLoc Exon Structure for
RN7SL213P
ECgene alternative splicing isoforms for
RN7SL213P

Expression for RN7SL213P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL213P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL213P Gene:

RN7SL213P
genes like me logo Genes that share expression patterns with RN7SL213P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL213P Gene

Orthologs for RN7SL213P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL213P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 35
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL213P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL213P Gene

ENSEMBL:
Gene Tree for RN7SL213P (if available)
TreeFam:
Gene Tree for RN7SL213P (if available)

Paralogs for RN7SL213P Gene

No data available for Paralogs for RN7SL213P Gene

Variants for RN7SL213P Gene

Relevant External Links for RN7SL213P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL213P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL213P Gene

Disorders for RN7SL213P Gene

No disorders were found for RN7SL213P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL213P Gene

Publications for RN7SL213P Gene

No publications were found for RN7SL213P Gene.

Products for RN7SL213P Gene

Sources for RN7SL213P Gene

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